Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHRNA1P02708 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.93■□□□□ 0.46
CHRNA1P02708 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHRNA1P02708 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHRNA1P02708 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHRNA1P02708 GGT4P-201ENST00000623672 1708 ntBASIC17.93■□□□□ 0.46
CHRNA1P02708 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHRNA1P02708 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.93■□□□□ 0.46
CHRNA1P02708 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHRNA1P02708 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.93■□□□□ 0.46
CHRNA1P02708 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CHRNA1P02708 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHRNA1P02708 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CHRNA1P02708 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
CHRNA1P02708 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC17.93■□□□□ 0.46
CHRNA1P02708 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CHRNA1P02708 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.93■□□□□ 0.46
CHRNA1P02708 AC024267.1-201ENST00000582320 895 ntBASIC17.93■□□□□ 0.46
CHRNA1P02708 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CHRNA1P02708 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.93■□□□□ 0.46
CHRNA1P02708 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC17.93■□□□□ 0.46
CHRNA1P02708 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.93■□□□□ 0.46
CHRNA1P02708 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHRNA1P02708 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHRNA1P02708 BTBD7P1-201ENST00000447253 1453 ntBASIC17.93■□□□□ 0.46
CHRNA1P02708 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.93■□□□□ 0.46
CHRNA1P02708 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.93■□□□□ 0.46
CHRNA1P02708 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHRNA1P02708 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHRNA1P02708 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHRNA1P02708 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHRNA1P02708 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHRNA1P02708 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHRNA1P02708 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.92■□□□□ 0.46
CHRNA1P02708 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CHRNA1P02708 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.92■□□□□ 0.46
CHRNA1P02708 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHRNA1P02708 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CHRNA1P02708 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CHRNA1P02708 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CHRNA1P02708 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CHRNA1P02708 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.92■□□□□ 0.46
CHRNA1P02708 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CHRNA1P02708 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHRNA1P02708 BCL2-203ENST00000589955 5011 ntBASIC17.92■□□□□ 0.46
CHRNA1P02708 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHRNA1P02708 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHRNA1P02708 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CHRNA1P02708 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHRNA1P02708 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CHRNA1P02708 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC17.92■□□□□ 0.46
CHRNA1P02708 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC17.92■□□□□ 0.46
CHRNA1P02708 AC044860.1-202ENST00000559481 777 ntBASIC17.92■□□□□ 0.46
CHRNA1P02708 AC104794.3-201ENST00000566840 1248 ntBASIC17.92■□□□□ 0.46
CHRNA1P02708 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC17.92■□□□□ 0.46
CHRNA1P02708 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CHRNA1P02708 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
CHRNA1P02708 HCG11-201ENST00000411553 5696 ntBASIC17.92■□□□□ 0.46
CHRNA1P02708 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHRNA1P02708 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHRNA1P02708 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.92■□□□□ 0.46
CHRNA1P02708 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.92■□□□□ 0.46
CHRNA1P02708 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CHRNA1P02708 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHRNA1P02708 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.91■□□□□ 0.46
CHRNA1P02708 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHRNA1P02708 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CHRNA1P02708 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CHRNA1P02708 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CHRNA1P02708 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CHRNA1P02708 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.91■□□□□ 0.46
CHRNA1P02708 CU639417.3-201ENST00000624240 1404 ntBASIC17.91■□□□□ 0.46
CHRNA1P02708 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CHRNA1P02708 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHRNA1P02708 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
CHRNA1P02708 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.91■□□□□ 0.46
CHRNA1P02708 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHRNA1P02708 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHRNA1P02708 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CHRNA1P02708 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
CHRNA1P02708 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CHRNA1P02708 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC17.91■□□□□ 0.46
CHRNA1P02708 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.91■□□□□ 0.46
CHRNA1P02708 HLA-J-202ENST00000469281 1241 ntBASIC17.91■□□□□ 0.46
CHRNA1P02708 RN7SL618P-201ENST00000477850 296 ntBASIC17.91■□□□□ 0.46
CHRNA1P02708 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.91■□□□□ 0.46
CHRNA1P02708 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC17.91■□□□□ 0.46
CHRNA1P02708 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CHRNA1P02708 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CHRNA1P02708 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHRNA1P02708 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHRNA1P02708 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHRNA1P02708 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CHRNA1P02708 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHRNA1P02708 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CHRNA1P02708 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHRNA1P02708 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.91■□□□□ 0.46
CHRNA1P02708 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC17.91■□□□□ 0.46
CHRNA1P02708 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHRNA1P02708 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms