Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GGPS1O95749 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
GGPS1O95749 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
GGPS1O95749 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC18.59■□□□□ 0.57
GGPS1O95749 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
GGPS1O95749 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
GGPS1O95749 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GGPS1O95749 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
GGPS1O95749 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
GGPS1O95749 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
GGPS1O95749 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
GGPS1O95749 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
GGPS1O95749 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC18.58■□□□□ 0.57
GGPS1O95749 AC099398.1-201ENST00000567919 2776 ntBASIC18.58■□□□□ 0.56
GGPS1O95749 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
GGPS1O95749 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
GGPS1O95749 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
GGPS1O95749 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
GGPS1O95749 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
GGPS1O95749 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
GGPS1O95749 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
GGPS1O95749 HNRNPA1P40-201ENST00000426371 1278 ntBASIC18.58■□□□□ 0.56
GGPS1O95749 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC18.58■□□□□ 0.56
GGPS1O95749 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC18.58■□□□□ 0.56
GGPS1O95749 UGT1A2P-201ENST00000454886 866 ntBASIC18.58■□□□□ 0.56
GGPS1O95749 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
GGPS1O95749 AP002490.2-201ENST00000524791 560 ntBASIC18.58■□□□□ 0.56
GGPS1O95749 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC18.58■□□□□ 0.56
GGPS1O95749 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC18.58■□□□□ 0.56
GGPS1O95749 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC18.58■□□□□ 0.56
GGPS1O95749 AC138761.1-201ENST00000584393 385 ntBASIC18.58■□□□□ 0.56
GGPS1O95749 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC18.58■□□□□ 0.56
GGPS1O95749 COQ4-205ENST00000609948 956 ntTSL 2 BASIC18.58■□□□□ 0.56
GGPS1O95749 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
GGPS1O95749 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.58■□□□□ 0.56
GGPS1O95749 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
GGPS1O95749 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.58■□□□□ 0.56
GGPS1O95749 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
GGPS1O95749 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
GGPS1O95749 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
GGPS1O95749 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
GGPS1O95749 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
GGPS1O95749 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
GGPS1O95749 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC18.58■□□□□ 0.56
GGPS1O95749 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
GGPS1O95749 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
GGPS1O95749 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
GGPS1O95749 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.58■□□□□ 0.56
GGPS1O95749 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
GGPS1O95749 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
GGPS1O95749 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC18.57■□□□□ 0.56
GGPS1O95749 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC18.57■□□□□ 0.56
GGPS1O95749 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
GGPS1O95749 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC18.57■□□□□ 0.56
GGPS1O95749 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
GGPS1O95749 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC18.57■□□□□ 0.56
GGPS1O95749 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18.57■□□□□ 0.56
GGPS1O95749 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC18.57■□□□□ 0.56
GGPS1O95749 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GGPS1O95749 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
GGPS1O95749 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
GGPS1O95749 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
GGPS1O95749 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.57■□□□□ 0.56
GGPS1O95749 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
GGPS1O95749 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GGPS1O95749 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
GGPS1O95749 HLA-H-201ENST00000383620 1096 ntBASIC18.57■□□□□ 0.56
GGPS1O95749 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC18.57■□□□□ 0.56
GGPS1O95749 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC18.57■□□□□ 0.56
GGPS1O95749 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GGPS1O95749 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC18.57■□□□□ 0.56
GGPS1O95749 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
GGPS1O95749 SPTSSB-204ENST00000617024 1292 ntBASIC18.57■□□□□ 0.56
GGPS1O95749 AL139011.1-202ENST00000642063 584 ntBASIC18.57■□□□□ 0.56
GGPS1O95749 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.57■□□□□ 0.56
GGPS1O95749 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GGPS1O95749 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
GGPS1O95749 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
GGPS1O95749 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GGPS1O95749 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
GGPS1O95749 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
GGPS1O95749 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GGPS1O95749 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GGPS1O95749 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC18.57■□□□□ 0.56
GGPS1O95749 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
GGPS1O95749 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GGPS1O95749 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
GGPS1O95749 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
GGPS1O95749 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GGPS1O95749 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GGPS1O95749 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GGPS1O95749 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
GGPS1O95749 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
GGPS1O95749 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.56■□□□□ 0.56
GGPS1O95749 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC18.56■□□□□ 0.56
GGPS1O95749 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC18.56■□□□□ 0.56
GGPS1O95749 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
GGPS1O95749 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
GGPS1O95749 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
GGPS1O95749 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms