Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC13.96□□□□□ -0.17
ABCA1O95477 MIR4453-201ENST00000584019 89 ntBASIC13.96□□□□□ -0.17
ABCA1O95477 AL161645.1-201ENST00000622716 1255 ntBASIC13.96□□□□□ -0.17
ABCA1O95477 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
ABCA1O95477 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
ABCA1O95477 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ABCA1O95477 KRT18P55-202ENST00000578578 1546 ntBASIC13.96□□□□□ -0.17
ABCA1O95477 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC13.96□□□□□ -0.17
ABCA1O95477 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
ABCA1O95477 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ABCA1O95477 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ABCA1O95477 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ABCA1O95477 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
ABCA1O95477 CEP83-AS1-201ENST00000623122 2482 ntBASIC13.96□□□□□ -0.18
ABCA1O95477 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC13.96□□□□□ -0.18
ABCA1O95477 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
ABCA1O95477 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
ABCA1O95477 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ABCA1O95477 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ABCA1O95477 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ABCA1O95477 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
ABCA1O95477 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC13.95□□□□□ -0.18
ABCA1O95477 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC13.95□□□□□ -0.18
ABCA1O95477 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC13.95□□□□□ -0.18
ABCA1O95477 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.95□□□□□ -0.18
ABCA1O95477 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC13.95□□□□□ -0.18
ABCA1O95477 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC13.95□□□□□ -0.18
ABCA1O95477 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ABCA1O95477 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ABCA1O95477 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC13.95□□□□□ -0.18
ABCA1O95477 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ABCA1O95477 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ABCA1O95477 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
ABCA1O95477 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ABCA1O95477 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ABCA1O95477 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
ABCA1O95477 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
ABCA1O95477 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ABCA1O95477 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
ABCA1O95477 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ABCA1O95477 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
ABCA1O95477 AC141586.5-201ENST00000624546 2050 ntBASIC13.95□□□□□ -0.18
ABCA1O95477 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
ABCA1O95477 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ABCA1O95477 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC13.95□□□□□ -0.18
ABCA1O95477 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ABCA1O95477 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC13.95□□□□□ -0.18
ABCA1O95477 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC13.95□□□□□ -0.18
ABCA1O95477 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC13.95□□□□□ -0.18
ABCA1O95477 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ABCA1O95477 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC13.95□□□□□ -0.18
ABCA1O95477 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
ABCA1O95477 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC13.95□□□□□ -0.18
ABCA1O95477 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC13.95□□□□□ -0.18
ABCA1O95477 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ABCA1O95477 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC13.95□□□□□ -0.18
ABCA1O95477 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
ABCA1O95477 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ABCA1O95477 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
ABCA1O95477 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ABCA1O95477 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC13.95□□□□□ -0.18
ABCA1O95477 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
ABCA1O95477 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
ABCA1O95477 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC13.95□□□□□ -0.18
ABCA1O95477 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ABCA1O95477 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ABCA1O95477 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ABCA1O95477 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ABCA1O95477 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC13.95□□□□□ -0.18
ABCA1O95477 AC100757.3-201ENST00000622361 1406 ntBASIC13.95□□□□□ -0.18
ABCA1O95477 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC13.94□□□□□ -0.18
ABCA1O95477 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ABCA1O95477 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
ABCA1O95477 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
ABCA1O95477 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ABCA1O95477 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC13.94□□□□□ -0.18
ABCA1O95477 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.94□□□□□ -0.18
ABCA1O95477 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC13.94□□□□□ -0.18
ABCA1O95477 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC13.94□□□□□ -0.18
ABCA1O95477 IGHV3-72-202ENST00000621503 303 ntBASIC13.94□□□□□ -0.18
ABCA1O95477 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
ABCA1O95477 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
ABCA1O95477 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
ABCA1O95477 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
ABCA1O95477 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
ABCA1O95477 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC13.94□□□□□ -0.18
ABCA1O95477 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC13.94□□□□□ -0.18
ABCA1O95477 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
ABCA1O95477 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC13.94□□□□□ -0.18
ABCA1O95477 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
ABCA1O95477 TPR-209ENST00000613151 2478 ntTSL 5 BASIC13.94□□□□□ -0.18
ABCA1O95477 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC13.94□□□□□ -0.18
ABCA1O95477 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ABCA1O95477 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
ABCA1O95477 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC13.94□□□□□ -0.18
ABCA1O95477 AC099398.1-201ENST00000567919 2776 ntBASIC13.94□□□□□ -0.18
ABCA1O95477 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
ABCA1O95477 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
ABCA1O95477 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
ABCA1O95477 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms