Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 KRT8P39-201ENST00000396270 1433 ntBASIC16.85■□□□□ 0.29
CDH16O75309 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.85■□□□□ 0.29
CDH16O75309 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH16O75309 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.85■□□□□ 0.29
CDH16O75309 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDH16O75309 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.85■□□□□ 0.29
CDH16O75309 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.85■□□□□ 0.29
CDH16O75309 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH16O75309 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH16O75309 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH16O75309 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH16O75309 CDC14C-201ENST00000428251 1719 ntBASIC16.84■□□□□ 0.29
CDH16O75309 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.84■□□□□ 0.29
CDH16O75309 AC073347.1-201ENST00000421633 2643 ntBASIC16.84■□□□□ 0.29
CDH16O75309 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDH16O75309 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
CDH16O75309 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CDH16O75309 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.84■□□□□ 0.29
CDH16O75309 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDH16O75309 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH16O75309 LINC02447-202ENST00000501888 2146 ntBASIC16.84■□□□□ 0.29
CDH16O75309 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH16O75309 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH16O75309 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH16O75309 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CDH16O75309 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.84■□□□□ 0.29
CDH16O75309 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.84■□□□□ 0.29
CDH16O75309 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDH16O75309 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
CDH16O75309 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.84■□□□□ 0.29
CDH16O75309 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.84■□□□□ 0.29
CDH16O75309 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CDH16O75309 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.84■□□□□ 0.29
CDH16O75309 AL590787.1-201ENST00000568856 1315 ntBASIC16.84■□□□□ 0.29
CDH16O75309 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CDH16O75309 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.84■□□□□ 0.29
CDH16O75309 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH16O75309 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH16O75309 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.84■□□□□ 0.29
CDH16O75309 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH16O75309 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.84■□□□□ 0.29
CDH16O75309 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH16O75309 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.84■□□□□ 0.29
CDH16O75309 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CDH16O75309 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.84■□□□□ 0.29
CDH16O75309 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.84■□□□□ 0.29
CDH16O75309 AC112504.1-201ENST00000623415 1841 ntBASIC16.84■□□□□ 0.29
CDH16O75309 REXO1L8P-201ENST00000604378 1897 ntBASIC16.84■□□□□ 0.29
CDH16O75309 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH16O75309 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH16O75309 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CDH16O75309 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.84■□□□□ 0.29
CDH16O75309 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.84■□□□□ 0.29
CDH16O75309 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CDH16O75309 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CDH16O75309 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
CDH16O75309 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
CDH16O75309 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
CDH16O75309 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH16O75309 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH16O75309 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDH16O75309 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH16O75309 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDH16O75309 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.83■□□□□ 0.28
CDH16O75309 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH16O75309 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.83■□□□□ 0.28
CDH16O75309 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.83■□□□□ 0.28
CDH16O75309 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.83■□□□□ 0.28
CDH16O75309 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH16O75309 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH16O75309 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CDH16O75309 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.83■□□□□ 0.28
CDH16O75309 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.83■□□□□ 0.28
CDH16O75309 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH16O75309 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.83■□□□□ 0.28
CDH16O75309 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CDH16O75309 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDH16O75309 AC073592.4-201ENST00000623827 446 ntBASIC16.83■□□□□ 0.28
CDH16O75309 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.83■□□□□ 0.28
CDH16O75309 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH16O75309 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDH16O75309 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH16O75309 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH16O75309 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.83■□□□□ 0.28
CDH16O75309 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH16O75309 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH16O75309 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH16O75309 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH16O75309 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.83■□□□□ 0.28
CDH16O75309 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH16O75309 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CDH16O75309 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.82■□□□□ 0.28
CDH16O75309 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CDH16O75309 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CDH16O75309 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH16O75309 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CDH16O75309 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH16O75309 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.82■□□□□ 0.28
CDH16O75309 LINC01144-201ENST00000626198 1710 ntBASIC16.82■□□□□ 0.28
CDH16O75309 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms