Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.18■□□□□ 0.02
RNF13O43567 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.18■□□□□ 0.02
RNF13O43567 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
RNF13O43567 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF13O43567 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
RNF13O43567 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF13O43567 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.18■□□□□ 0.02
RNF13O43567 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RNF13O43567 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.18■□□□□ 0.02
RNF13O43567 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.18■□□□□ 0.02
RNF13O43567 PAWRP1-201ENST00000451083 565 ntBASIC15.18■□□□□ 0.02
RNF13O43567 EMBP1-201ENST00000458200 901 ntBASIC15.18■□□□□ 0.02
RNF13O43567 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.18■□□□□ 0.02
RNF13O43567 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF13O43567 RNPS1P1-201ENST00000507437 918 ntBASIC15.18■□□□□ 0.02
RNF13O43567 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.18■□□□□ 0.02
RNF13O43567 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.18■□□□□ 0.02
RNF13O43567 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.18■□□□□ 0.02
RNF13O43567 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.18■□□□□ 0.02
RNF13O43567 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF13O43567 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RNF13O43567 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.18■□□□□ 0.02
RNF13O43567 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RNF13O43567 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF13O43567 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF13O43567 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF13O43567 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF13O43567 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF13O43567 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF13O43567 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
RNF13O43567 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
RNF13O43567 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF13O43567 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RNF13O43567 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.17■□□□□ 0.02
RNF13O43567 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RNF13O43567 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RNF13O43567 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.17■□□□□ 0.02
RNF13O43567 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
RNF13O43567 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
RNF13O43567 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.17■□□□□ 0.02
RNF13O43567 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
RNF13O43567 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RNF13O43567 PAUPAR-201ENST00000630360 2965 ntBASIC15.17■□□□□ 0.02
RNF13O43567 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RNF13O43567 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF13O43567 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF13O43567 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.17■□□□□ 0.02
RNF13O43567 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RNF13O43567 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
RNF13O43567 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF13O43567 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RNF13O43567 TOP3BP1-201ENST00000420768 1380 ntBASIC15.17■□□□□ 0.02
RNF13O43567 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF13O43567 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RNF13O43567 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.17■□□□□ 0.02
RNF13O43567 FAM197Y8-203ENST00000450145 560 ntBASIC15.17■□□□□ 0.02
RNF13O43567 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
RNF13O43567 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.17■□□□□ 0.02
RNF13O43567 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.17■□□□□ 0.02
RNF13O43567 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
RNF13O43567 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.17■□□□□ 0.02
RNF13O43567 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
RNF13O43567 AL805961.1-202ENST00000641562 540 ntBASIC15.17■□□□□ 0.02
RNF13O43567 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF13O43567 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF13O43567 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
RNF13O43567 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF13O43567 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF13O43567 AC103702.1-201ENST00000548801 2630 ntBASIC15.17■□□□□ 0.02
RNF13O43567 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF13O43567 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RNF13O43567 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
RNF13O43567 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF13O43567 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RNF13O43567 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
RNF13O43567 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF13O43567 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.17■□□□□ 0.02
RNF13O43567 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.17■□□□□ 0.02
RNF13O43567 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.17■□□□□ 0.02
RNF13O43567 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RNF13O43567 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF13O43567 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF13O43567 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF13O43567 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF13O43567 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.16■□□□□ 0.02
RNF13O43567 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.16■□□□□ 0.02
RNF13O43567 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF13O43567 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF13O43567 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.16■□□□□ 0.02
RNF13O43567 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF13O43567 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.16■□□□□ 0.02
RNF13O43567 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF13O43567 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
RNF13O43567 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF13O43567 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RNF13O43567 ALOX12P2-203ENST00000570921 1945 ntBASIC15.16■□□□□ 0.02
RNF13O43567 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RNF13O43567 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF13O43567 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
RNF13O43567 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms