Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.8■□□□□ 0.12
PROM1O43490 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
PROM1O43490 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.8■□□□□ 0.12
PROM1O43490 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
PROM1O43490 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PROM1O43490 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
PROM1O43490 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
PROM1O43490 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PROM1O43490 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PROM1O43490 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PROM1O43490 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
PROM1O43490 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PROM1O43490 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PROM1O43490 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PROM1O43490 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PROM1O43490 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.8■□□□□ 0.12
PROM1O43490 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.8■□□□□ 0.12
PROM1O43490 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PROM1O43490 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PROM1O43490 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
PROM1O43490 AC092865.5-201ENST00000545435 363 ntBASIC15.8■□□□□ 0.12
PROM1O43490 AC023141.13-201ENST00000604991 943 ntBASIC15.8■□□□□ 0.12
PROM1O43490 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.8■□□□□ 0.12
PROM1O43490 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.8■□□□□ 0.12
PROM1O43490 AC007064.4-201ENST00000637740 555 ntBASIC15.8■□□□□ 0.12
PROM1O43490 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
PROM1O43490 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
PROM1O43490 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
PROM1O43490 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
PROM1O43490 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PROM1O43490 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PROM1O43490 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
PROM1O43490 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PROM1O43490 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PROM1O43490 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.8■□□□□ 0.12
PROM1O43490 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PROM1O43490 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PROM1O43490 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PROM1O43490 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PROM1O43490 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PROM1O43490 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
PROM1O43490 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PROM1O43490 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
PROM1O43490 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PROM1O43490 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
PROM1O43490 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.79■□□□□ 0.12
PROM1O43490 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PROM1O43490 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PROM1O43490 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
PROM1O43490 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
PROM1O43490 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
PROM1O43490 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PROM1O43490 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PROM1O43490 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PROM1O43490 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PROM1O43490 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
PROM1O43490 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
PROM1O43490 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PROM1O43490 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PROM1O43490 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PROM1O43490 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.79■□□□□ 0.12
PROM1O43490 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.79■□□□□ 0.12
PROM1O43490 AL591424.1-201ENST00000442569 1213 ntBASIC15.79■□□□□ 0.12
PROM1O43490 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
PROM1O43490 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.79■□□□□ 0.12
PROM1O43490 KRT18P58-201ENST00000527480 1120 ntBASIC15.79■□□□□ 0.12
PROM1O43490 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.79■□□□□ 0.12
PROM1O43490 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.79■□□□□ 0.12
PROM1O43490 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.79■□□□□ 0.12
PROM1O43490 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.79■□□□□ 0.12
PROM1O43490 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
PROM1O43490 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PROM1O43490 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.79■□□□□ 0.12
PROM1O43490 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.79■□□□□ 0.12
PROM1O43490 AC027601.4-201ENST00000611259 610 ntBASIC15.79■□□□□ 0.12
PROM1O43490 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.79■□□□□ 0.12
PROM1O43490 AC004877.2-201ENST00000623941 599 ntBASIC15.79■□□□□ 0.12
PROM1O43490 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PROM1O43490 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PROM1O43490 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
PROM1O43490 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PROM1O43490 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.79■□□□□ 0.12
PROM1O43490 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PROM1O43490 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.79■□□□□ 0.12
PROM1O43490 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.79■□□□□ 0.12
PROM1O43490 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.78■□□□□ 0.12
PROM1O43490 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PROM1O43490 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.78■□□□□ 0.12
PROM1O43490 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PROM1O43490 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PROM1O43490 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PROM1O43490 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PROM1O43490 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
PROM1O43490 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
PROM1O43490 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.78■□□□□ 0.12
PROM1O43490 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PROM1O43490 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PROM1O43490 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
PROM1O43490 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PROM1O43490 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms