Protein–RNA interactions for Protein: O15078

CEP290, Centrosomal protein of 290 kDa, humanhuman

Predictions only

Length 2,479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290O15078 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CEP290O15078 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CEP290O15078 FRMD8P1-201ENST00000440433 1524 ntBASIC17.71■□□□□ 0.43
CEP290O15078 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CEP290O15078 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.42
CEP290O15078 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
CEP290O15078 ARTN-209ENST00000479128 471 ntTSL 3 BASIC17.71■□□□□ 0.42
CEP290O15078 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC17.71■□□□□ 0.42
CEP290O15078 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC17.71■□□□□ 0.42
CEP290O15078 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.71■□□□□ 0.42
CEP290O15078 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC17.71■□□□□ 0.42
CEP290O15078 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.71■□□□□ 0.42
CEP290O15078 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.71■□□□□ 0.42
CEP290O15078 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CEP290O15078 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.7■□□□□ 0.42
CEP290O15078 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CEP290O15078 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.7■□□□□ 0.42
CEP290O15078 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CEP290O15078 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.7■□□□□ 0.42
CEP290O15078 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CEP290O15078 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.7■□□□□ 0.42
CEP290O15078 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.7■□□□□ 0.42
CEP290O15078 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CEP290O15078 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CEP290O15078 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC17.7■□□□□ 0.42
CEP290O15078 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC17.7■□□□□ 0.42
CEP290O15078 AC008267.1-201ENST00000474858 1069 ntBASIC17.7■□□□□ 0.42
CEP290O15078 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC17.7■□□□□ 0.42
CEP290O15078 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC17.7■□□□□ 0.42
CEP290O15078 AP006547.1-201ENST00000563435 692 ntBASIC17.7■□□□□ 0.42
CEP290O15078 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC17.7■□□□□ 0.42
CEP290O15078 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CEP290O15078 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC17.7■□□□□ 0.42
CEP290O15078 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.7■□□□□ 0.42
CEP290O15078 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CEP290O15078 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CEP290O15078 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CEP290O15078 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CEP290O15078 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC17.7■□□□□ 0.42
CEP290O15078 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.7■□□□□ 0.42
CEP290O15078 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.7■□□□□ 0.42
CEP290O15078 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CEP290O15078 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CEP290O15078 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC17.7■□□□□ 0.42
CEP290O15078 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC17.7■□□□□ 0.42
CEP290O15078 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC17.7■□□□□ 0.42
CEP290O15078 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CEP290O15078 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CEP290O15078 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CEP290O15078 AC005702.4-201ENST00000618393 416 ntBASIC17.7■□□□□ 0.42
CEP290O15078 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CEP290O15078 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CEP290O15078 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CEP290O15078 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CEP290O15078 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CEP290O15078 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CEP290O15078 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CEP290O15078 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CEP290O15078 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CEP290O15078 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.69■□□□□ 0.42
CEP290O15078 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CEP290O15078 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CEP290O15078 UFM1-202ENST00000379649 846 ntTSL 4 BASIC17.69■□□□□ 0.42
CEP290O15078 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CEP290O15078 AC093433.1-201ENST00000458048 571 ntBASIC17.69■□□□□ 0.42
CEP290O15078 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC17.69■□□□□ 0.42
CEP290O15078 LARP4-220ENST00000615080 856 ntTSL 5 BASIC17.69■□□□□ 0.42
CEP290O15078 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CEP290O15078 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CEP290O15078 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CEP290O15078 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CEP290O15078 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
CEP290O15078 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CEP290O15078 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CEP290O15078 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC17.69■□□□□ 0.42
CEP290O15078 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.69■□□□□ 0.42
CEP290O15078 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CEP290O15078 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CEP290O15078 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC17.69■□□□□ 0.42
CEP290O15078 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CEP290O15078 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CEP290O15078 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CEP290O15078 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC17.69■□□□□ 0.42
CEP290O15078 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CEP290O15078 NKAIN1P1-201ENST00000435754 582 ntBASIC17.69■□□□□ 0.42
CEP290O15078 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC17.69■□□□□ 0.42
CEP290O15078 PFN2-215ENST00000497148 743 ntTSL 4 BASIC17.69■□□□□ 0.42
CEP290O15078 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.69■□□□□ 0.42
CEP290O15078 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC17.69■□□□□ 0.42
CEP290O15078 AC124283.3-201ENST00000570869 594 ntBASIC17.69■□□□□ 0.42
CEP290O15078 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC17.69■□□□□ 0.42
CEP290O15078 HLA-C-210ENST00000640219 976 ntBASIC17.69■□□□□ 0.42
CEP290O15078 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CEP290O15078 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC17.69■□□□□ 0.42
CEP290O15078 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.68■□□□□ 0.42
CEP290O15078 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CEP290O15078 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CEP290O15078 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
CEP290O15078 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.68■□□□□ 0.42
CEP290O15078 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms