Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
UPK2O00526 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
UPK2O00526 AL365203.3-201ENST00000609742 2057 ntBASIC13.36□□□□□ -0.27
UPK2O00526 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
UPK2O00526 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC13.36□□□□□ -0.27
UPK2O00526 AC007950.2-201ENST00000615045 2347 ntBASIC13.36□□□□□ -0.27
UPK2O00526 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC13.36□□□□□ -0.27
UPK2O00526 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UPK2O00526 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
UPK2O00526 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
UPK2O00526 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
UPK2O00526 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
UPK2O00526 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
UPK2O00526 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UPK2O00526 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
UPK2O00526 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
UPK2O00526 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
UPK2O00526 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
UPK2O00526 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
UPK2O00526 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
UPK2O00526 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
UPK2O00526 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
UPK2O00526 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
UPK2O00526 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC13.36□□□□□ -0.27
UPK2O00526 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UPK2O00526 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
UPK2O00526 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC13.36□□□□□ -0.27
UPK2O00526 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
UPK2O00526 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC13.36□□□□□ -0.27
UPK2O00526 HCG4-201ENST00000418983 998 ntBASIC13.36□□□□□ -0.27
UPK2O00526 CDK2AP2P3-201ENST00000422476 372 ntBASIC13.36□□□□□ -0.27
UPK2O00526 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC13.36□□□□□ -0.27
UPK2O00526 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC13.36□□□□□ -0.27
UPK2O00526 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
UPK2O00526 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UPK2O00526 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UPK2O00526 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UPK2O00526 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
UPK2O00526 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UPK2O00526 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
UPK2O00526 ABR-203ENST00000536794 2213 ntTSL 2 BASIC13.36□□□□□ -0.27
UPK2O00526 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UPK2O00526 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
UPK2O00526 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC13.36□□□□□ -0.27
UPK2O00526 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
UPK2O00526 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UPK2O00526 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
UPK2O00526 AC006449.6-201ENST00000612330 2296 ntBASIC13.36□□□□□ -0.27
UPK2O00526 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UPK2O00526 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
UPK2O00526 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC13.35□□□□□ -0.27
UPK2O00526 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
UPK2O00526 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
UPK2O00526 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
UPK2O00526 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
UPK2O00526 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
UPK2O00526 AC008894.3-201ENST00000624324 3103 ntBASIC13.35□□□□□ -0.27
UPK2O00526 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC13.35□□□□□ -0.27
UPK2O00526 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
UPK2O00526 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
UPK2O00526 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
UPK2O00526 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC13.35□□□□□ -0.27
UPK2O00526 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
UPK2O00526 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
UPK2O00526 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
UPK2O00526 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
UPK2O00526 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
UPK2O00526 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
UPK2O00526 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC13.35□□□□□ -0.27
UPK2O00526 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
UPK2O00526 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
UPK2O00526 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
UPK2O00526 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
UPK2O00526 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC13.35□□□□□ -0.27
UPK2O00526 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
UPK2O00526 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
UPK2O00526 KRT18P27-201ENST00000427733 1299 ntBASIC13.35□□□□□ -0.27
UPK2O00526 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
UPK2O00526 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC13.35□□□□□ -0.27
UPK2O00526 NMU-205ENST00000511469 756 ntTSL 3 BASIC13.35□□□□□ -0.27
UPK2O00526 AC136632.2-201ENST00000512891 861 ntBASIC13.35□□□□□ -0.27
UPK2O00526 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC13.35□□□□□ -0.27
UPK2O00526 OR7E14P-202ENST00000530490 1290 ntBASIC13.35□□□□□ -0.27
UPK2O00526 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC13.35□□□□□ -0.27
UPK2O00526 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
UPK2O00526 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC13.35□□□□□ -0.27
UPK2O00526 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
UPK2O00526 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
UPK2O00526 CICP6-201ENST00000457191 2729 ntBASIC13.35□□□□□ -0.27
UPK2O00526 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC13.35□□□□□ -0.27
UPK2O00526 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
UPK2O00526 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
UPK2O00526 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC13.35□□□□□ -0.27
UPK2O00526 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
UPK2O00526 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
UPK2O00526 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
UPK2O00526 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
UPK2O00526 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
UPK2O00526 HARS-203ENST00000431330 1774 ntTSL 2 BASIC13.35□□□□□ -0.27
UPK2O00526 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms