Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.15■□□□□ 0.02
NPIPA2E9PIF3 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.15■□□□□ 0.02
NPIPA2E9PIF3 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPA2E9PIF3 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.15■□□□□ 0.02
NPIPA2E9PIF3 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.15■□□□□ 0.02
NPIPA2E9PIF3 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.15■□□□□ 0.02
NPIPA2E9PIF3 RN7SL589P-201ENST00000481268 310 ntBASIC15.15■□□□□ 0.02
NPIPA2E9PIF3 AC079140.1-201ENST00000508039 487 ntBASIC15.15■□□□□ 0.02
NPIPA2E9PIF3 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.15■□□□□ 0.02
NPIPA2E9PIF3 AL135744.1-201ENST00000565098 629 ntBASIC15.15■□□□□ 0.02
NPIPA2E9PIF3 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.15■□□□□ 0.02
NPIPA2E9PIF3 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.15■□□□□ 0.02
NPIPA2E9PIF3 AC093512.1-201ENST00000617969 520 ntBASIC15.15■□□□□ 0.02
NPIPA2E9PIF3 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.15■□□□□ 0.02
NPIPA2E9PIF3 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.15■□□□□ 0.02
NPIPA2E9PIF3 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPA2E9PIF3 AD000864.1-201ENST00000624076 2295 ntBASIC15.15■□□□□ 0.02
NPIPA2E9PIF3 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPA2E9PIF3 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPA2E9PIF3 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.15■□□□□ 0.02
NPIPA2E9PIF3 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPA2E9PIF3 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.15■□□□□ 0.02
NPIPA2E9PIF3 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPA2E9PIF3 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPA2E9PIF3 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPA2E9PIF3 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
NPIPA2E9PIF3 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
NPIPA2E9PIF3 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.15■□□□□ 0.02
NPIPA2E9PIF3 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPA2E9PIF3 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPA2E9PIF3 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPIPA2E9PIF3 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
NPIPA2E9PIF3 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
NPIPA2E9PIF3 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPIPA2E9PIF3 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC15.14■□□□□ 0.01
NPIPA2E9PIF3 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.14■□□□□ 0.01
NPIPA2E9PIF3 AC005915.1-201ENST00000624912 2018 ntBASIC15.14■□□□□ 0.01
NPIPA2E9PIF3 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
NPIPA2E9PIF3 TOP3BP1-201ENST00000420768 1380 ntBASIC15.14■□□□□ 0.01
NPIPA2E9PIF3 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.14■□□□□ 0.01
NPIPA2E9PIF3 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPIPA2E9PIF3 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPIPA2E9PIF3 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
NPIPA2E9PIF3 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
NPIPA2E9PIF3 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPIPA2E9PIF3 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NPIPA2E9PIF3 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
NPIPA2E9PIF3 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPIPA2E9PIF3 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
NPIPA2E9PIF3 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPIPA2E9PIF3 HCG4-201ENST00000418983 998 ntBASIC15.14■□□□□ 0.01
NPIPA2E9PIF3 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPIPA2E9PIF3 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPIPA2E9PIF3 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPIPA2E9PIF3 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
NPIPA2E9PIF3 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.14■□□□□ 0.01
NPIPA2E9PIF3 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.14■□□□□ 0.01
NPIPA2E9PIF3 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.14■□□□□ 0.01
NPIPA2E9PIF3 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NPIPA2E9PIF3 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
NPIPA2E9PIF3 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.14■□□□□ 0.01
NPIPA2E9PIF3 AC093520.2-201ENST00000561830 333 ntBASIC15.14■□□□□ 0.01
NPIPA2E9PIF3 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.14■□□□□ 0.01
NPIPA2E9PIF3 AL009183.1-201ENST00000603760 355 ntBASIC15.14■□□□□ 0.01
NPIPA2E9PIF3 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.14■□□□□ 0.01
NPIPA2E9PIF3 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.14■□□□□ 0.01
NPIPA2E9PIF3 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPIPA2E9PIF3 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
NPIPA2E9PIF3 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPIPA2E9PIF3 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPIPA2E9PIF3 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPIPA2E9PIF3 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.14■□□□□ 0.01
NPIPA2E9PIF3 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPIPA2E9PIF3 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NPIPA2E9PIF3 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
NPIPA2E9PIF3 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NPIPA2E9PIF3 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NPIPA2E9PIF3 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NPIPA2E9PIF3 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
NPIPA2E9PIF3 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
NPIPA2E9PIF3 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NPIPA2E9PIF3 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
NPIPA2E9PIF3 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
NPIPA2E9PIF3 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NPIPA2E9PIF3 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.13■□□□□ 0.01
NPIPA2E9PIF3 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NPIPA2E9PIF3 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.13■□□□□ 0.01
NPIPA2E9PIF3 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
NPIPA2E9PIF3 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.13■□□□□ 0.01
NPIPA2E9PIF3 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
NPIPA2E9PIF3 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NPIPA2E9PIF3 IGHV3-62-201ENST00000520057 340 ntBASIC15.13■□□□□ 0.01
NPIPA2E9PIF3 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.13■□□□□ 0.01
NPIPA2E9PIF3 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NPIPA2E9PIF3 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.13■□□□□ 0.01
NPIPA2E9PIF3 AC243562.1-201ENST00000560672 389 ntBASIC15.13■□□□□ 0.01
NPIPA2E9PIF3 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.13■□□□□ 0.01
NPIPA2E9PIF3 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.13■□□□□ 0.01
NPIPA2E9PIF3 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.13■□□□□ 0.01
NPIPA2E9PIF3 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms