Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV18A0A075B6X5 PRAL-201ENST00000624952 3286 ntBASIC14.36□□□□□ -0.11
TRAV18A0A075B6X5 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV18A0A075B6X5 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV18A0A075B6X5 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV18A0A075B6X5 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TRAV18A0A075B6X5 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV18A0A075B6X5 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC14.36□□□□□ -0.11
TRAV18A0A075B6X5 AL845331.1-201ENST00000424978 1190 ntBASIC14.36□□□□□ -0.11
TRAV18A0A075B6X5 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV18A0A075B6X5 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV18A0A075B6X5 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC14.36□□□□□ -0.11
TRAV18A0A075B6X5 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC14.36□□□□□ -0.11
TRAV18A0A075B6X5 AC009533.2-201ENST00000543664 586 ntBASIC14.36□□□□□ -0.11
TRAV18A0A075B6X5 AC013467.2-201ENST00000605472 835 ntBASIC14.36□□□□□ -0.11
TRAV18A0A075B6X5 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
TRAV18A0A075B6X5 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC14.36□□□□□ -0.11
TRAV18A0A075B6X5 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV18A0A075B6X5 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TRAV18A0A075B6X5 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV18A0A075B6X5 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV18A0A075B6X5 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TRAV18A0A075B6X5 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.36□□□□□ -0.11
TRAV18A0A075B6X5 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.36□□□□□ -0.11
TRAV18A0A075B6X5 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.36□□□□□ -0.11
TRAV18A0A075B6X5 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV18A0A075B6X5 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.36□□□□□ -0.11
TRAV18A0A075B6X5 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV18A0A075B6X5 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.36□□□□□ -0.11
TRAV18A0A075B6X5 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.36□□□□□ -0.11
TRAV18A0A075B6X5 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV18A0A075B6X5 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.36□□□□□ -0.11
TRAV18A0A075B6X5 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV18A0A075B6X5 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV18A0A075B6X5 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.36□□□□□ -0.11
TRAV18A0A075B6X5 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
TRAV18A0A075B6X5 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV18A0A075B6X5 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.36□□□□□ -0.11
TRAV18A0A075B6X5 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV18A0A075B6X5 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV18A0A075B6X5 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV18A0A075B6X5 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV18A0A075B6X5 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV18A0A075B6X5 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.36□□□□□ -0.11
TRAV18A0A075B6X5 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV18A0A075B6X5 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
TRAV18A0A075B6X5 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.35□□□□□ -0.11
TRAV18A0A075B6X5 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV18A0A075B6X5 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV18A0A075B6X5 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV18A0A075B6X5 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV18A0A075B6X5 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV18A0A075B6X5 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV18A0A075B6X5 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.35□□□□□ -0.11
TRAV18A0A075B6X5 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV18A0A075B6X5 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV18A0A075B6X5 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.35□□□□□ -0.11
TRAV18A0A075B6X5 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV18A0A075B6X5 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV18A0A075B6X5 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV18A0A075B6X5 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV18A0A075B6X5 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV18A0A075B6X5 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
TRAV18A0A075B6X5 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC14.35□□□□□ -0.11
TRAV18A0A075B6X5 ACTG1P4-201ENST00000425123 1122 ntBASIC14.35□□□□□ -0.11
TRAV18A0A075B6X5 HOMER2P1-201ENST00000455653 964 ntBASIC14.35□□□□□ -0.11
TRAV18A0A075B6X5 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV18A0A075B6X5 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC14.35□□□□□ -0.11
TRAV18A0A075B6X5 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV18A0A075B6X5 IGHV3-41-201ENST00000613121 348 ntBASIC14.35□□□□□ -0.11
TRAV18A0A075B6X5 HYMAI.1-201ENST00000620949 238 ntBASIC14.35□□□□□ -0.11
TRAV18A0A075B6X5 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC14.35□□□□□ -0.11
TRAV18A0A075B6X5 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC14.35□□□□□ -0.11
TRAV18A0A075B6X5 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV18A0A075B6X5 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV18A0A075B6X5 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV18A0A075B6X5 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC14.35□□□□□ -0.11
TRAV18A0A075B6X5 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV18A0A075B6X5 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV18A0A075B6X5 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.35□□□□□ -0.11
TRAV18A0A075B6X5 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.35□□□□□ -0.11
TRAV18A0A075B6X5 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
TRAV18A0A075B6X5 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.35□□□□□ -0.11
TRAV18A0A075B6X5 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV18A0A075B6X5 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV18A0A075B6X5 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.35□□□□□ -0.11
TRAV18A0A075B6X5 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV18A0A075B6X5 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.35□□□□□ -0.11
TRAV18A0A075B6X5 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
TRAV18A0A075B6X5 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV18A0A075B6X5 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV18A0A075B6X5 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV18A0A075B6X5 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.35□□□□□ -0.11
TRAV18A0A075B6X5 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.35□□□□□ -0.11
TRAV18A0A075B6X5 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
TRAV18A0A075B6X5 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
TRAV18A0A075B6X5 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
TRAV18A0A075B6X5 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.34□□□□□ -0.11
TRAV18A0A075B6X5 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
TRAV18A0A075B6X5 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms