Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.77■□□□□ 0.28
PCDHGC4Q9Y5F7 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
PCDHGC4Q9Y5F7 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGC4Q9Y5F7 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
PCDHGC4Q9Y5F7 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGC4Q9Y5F7 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGC4Q9Y5F7 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGC4Q9Y5F7 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGC4Q9Y5F7 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.77■□□□□ 0.28
PCDHGC4Q9Y5F7 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
PCDHGC4Q9Y5F7 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHGC4Q9Y5F7 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHGC4Q9Y5F7 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
PCDHGC4Q9Y5F7 GPAA1P2-202ENST00000606848 1787 ntBASIC16.77■□□□□ 0.27
PCDHGC4Q9Y5F7 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.76■□□□□ 0.27
PCDHGC4Q9Y5F7 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.76■□□□□ 0.27
PCDHGC4Q9Y5F7 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
PCDHGC4Q9Y5F7 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDHGC4Q9Y5F7 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGC4Q9Y5F7 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGC4Q9Y5F7 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
PCDHGC4Q9Y5F7 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
PCDHGC4Q9Y5F7 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGC4Q9Y5F7 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
PCDHGC4Q9Y5F7 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
PCDHGC4Q9Y5F7 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGC4Q9Y5F7 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGC4Q9Y5F7 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDHGC4Q9Y5F7 MIR1233-2-201ENST00000408138 82 ntBASIC16.76■□□□□ 0.27
PCDHGC4Q9Y5F7 MIR1233-1-201ENST00000408722 82 ntBASIC16.76■□□□□ 0.27
PCDHGC4Q9Y5F7 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.76■□□□□ 0.27
PCDHGC4Q9Y5F7 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.76■□□□□ 0.27
PCDHGC4Q9Y5F7 ACTG1P14-201ENST00000446382 1122 ntBASIC16.76■□□□□ 0.27
PCDHGC4Q9Y5F7 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.76■□□□□ 0.27
PCDHGC4Q9Y5F7 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.76■□□□□ 0.27
PCDHGC4Q9Y5F7 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.76■□□□□ 0.27
PCDHGC4Q9Y5F7 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.76■□□□□ 0.27
PCDHGC4Q9Y5F7 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.76■□□□□ 0.27
PCDHGC4Q9Y5F7 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDHGC4Q9Y5F7 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGC4Q9Y5F7 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.76■□□□□ 0.27
PCDHGC4Q9Y5F7 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDHGC4Q9Y5F7 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGC4Q9Y5F7 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGC4Q9Y5F7 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.76■□□□□ 0.27
PCDHGC4Q9Y5F7 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGC4Q9Y5F7 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDHGC4Q9Y5F7 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
PCDHGC4Q9Y5F7 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGC4Q9Y5F7 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
PCDHGC4Q9Y5F7 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
PCDHGC4Q9Y5F7 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGC4Q9Y5F7 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGC4Q9Y5F7 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDHGC4Q9Y5F7 ALOX12P2-203ENST00000570921 1945 ntBASIC16.76■□□□□ 0.27
PCDHGC4Q9Y5F7 AC099398.1-201ENST00000567919 2776 ntBASIC16.76■□□□□ 0.27
PCDHGC4Q9Y5F7 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGC4Q9Y5F7 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGC4Q9Y5F7 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGC4Q9Y5F7 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGC4Q9Y5F7 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGC4Q9Y5F7 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGC4Q9Y5F7 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGC4Q9Y5F7 AC005052.1-201ENST00000625181 2492 ntBASIC16.75■□□□□ 0.27
PCDHGC4Q9Y5F7 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
PCDHGC4Q9Y5F7 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGC4Q9Y5F7 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGC4Q9Y5F7 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.75■□□□□ 0.27
PCDHGC4Q9Y5F7 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGC4Q9Y5F7 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGC4Q9Y5F7 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
PCDHGC4Q9Y5F7 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.75■□□□□ 0.27
PCDHGC4Q9Y5F7 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGC4Q9Y5F7 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGC4Q9Y5F7 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGC4Q9Y5F7 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGC4Q9Y5F7 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGC4Q9Y5F7 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGC4Q9Y5F7 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGC4Q9Y5F7 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGC4Q9Y5F7 ADH5P3-201ENST00000433842 1137 ntBASIC16.75■□□□□ 0.27
PCDHGC4Q9Y5F7 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.75■□□□□ 0.27
PCDHGC4Q9Y5F7 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
PCDHGC4Q9Y5F7 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.75■□□□□ 0.27
PCDHGC4Q9Y5F7 RARRES2P8-201ENST00000566335 367 ntBASIC16.75■□□□□ 0.27
PCDHGC4Q9Y5F7 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
PCDHGC4Q9Y5F7 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGC4Q9Y5F7 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGC4Q9Y5F7 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.75■□□□□ 0.27
PCDHGC4Q9Y5F7 WASH6P-202ENST00000359512 1437 ntBASIC16.75■□□□□ 0.27
PCDHGC4Q9Y5F7 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGC4Q9Y5F7 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
PCDHGC4Q9Y5F7 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
PCDHGC4Q9Y5F7 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
PCDHGC4Q9Y5F7 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGC4Q9Y5F7 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGC4Q9Y5F7 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
PCDHGC4Q9Y5F7 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.75■□□□□ 0.27
PCDHGC4Q9Y5F7 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.74■□□□□ 0.27
PCDHGC4Q9Y5F7 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms