Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.72■□□□□ 0.27
PKP3Q9Y446 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PKP3Q9Y446 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PKP3Q9Y446 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.72■□□□□ 0.27
PKP3Q9Y446 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
PKP3Q9Y446 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PKP3Q9Y446 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.72■□□□□ 0.27
PKP3Q9Y446 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PKP3Q9Y446 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PKP3Q9Y446 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.72■□□□□ 0.27
PKP3Q9Y446 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PKP3Q9Y446 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
PKP3Q9Y446 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.72■□□□□ 0.27
PKP3Q9Y446 SNX33P1-201ENST00000592116 1762 ntBASIC16.72■□□□□ 0.27
PKP3Q9Y446 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.72■□□□□ 0.27
PKP3Q9Y446 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PKP3Q9Y446 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PKP3Q9Y446 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.72■□□□□ 0.27
PKP3Q9Y446 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PKP3Q9Y446 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
PKP3Q9Y446 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.72■□□□□ 0.27
PKP3Q9Y446 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PKP3Q9Y446 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.72■□□□□ 0.27
PKP3Q9Y446 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.72■□□□□ 0.27
PKP3Q9Y446 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.72■□□□□ 0.27
PKP3Q9Y446 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
PKP3Q9Y446 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
PKP3Q9Y446 KRT19P2-202ENST00000557173 1012 ntBASIC16.72■□□□□ 0.27
PKP3Q9Y446 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.72■□□□□ 0.27
PKP3Q9Y446 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
PKP3Q9Y446 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.72■□□□□ 0.27
PKP3Q9Y446 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.72■□□□□ 0.27
PKP3Q9Y446 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.72■□□□□ 0.27
PKP3Q9Y446 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.72■□□□□ 0.27
PKP3Q9Y446 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.72■□□□□ 0.27
PKP3Q9Y446 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PKP3Q9Y446 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.72■□□□□ 0.27
PKP3Q9Y446 PCDHA14-201ENST00000506751 2298 ntBASIC16.72■□□□□ 0.27
PKP3Q9Y446 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PKP3Q9Y446 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PKP3Q9Y446 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PKP3Q9Y446 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PKP3Q9Y446 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PKP3Q9Y446 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PKP3Q9Y446 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
PKP3Q9Y446 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PKP3Q9Y446 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
PKP3Q9Y446 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
PKP3Q9Y446 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.71■□□□□ 0.27
PKP3Q9Y446 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.71■□□□□ 0.27
PKP3Q9Y446 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PKP3Q9Y446 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.71■□□□□ 0.27
PKP3Q9Y446 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.71■□□□□ 0.27
PKP3Q9Y446 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PKP3Q9Y446 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PKP3Q9Y446 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PKP3Q9Y446 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.71■□□□□ 0.27
PKP3Q9Y446 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PKP3Q9Y446 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.71■□□□□ 0.27
PKP3Q9Y446 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
PKP3Q9Y446 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PKP3Q9Y446 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.71■□□□□ 0.27
PKP3Q9Y446 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.71■□□□□ 0.27
PKP3Q9Y446 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PKP3Q9Y446 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PKP3Q9Y446 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PKP3Q9Y446 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
PKP3Q9Y446 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PKP3Q9Y446 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
PKP3Q9Y446 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.71■□□□□ 0.27
PKP3Q9Y446 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
PKP3Q9Y446 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PKP3Q9Y446 AC092171.3-201ENST00000610122 2651 ntBASIC16.71■□□□□ 0.26
PKP3Q9Y446 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PKP3Q9Y446 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PKP3Q9Y446 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
PKP3Q9Y446 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.7■□□□□ 0.26
PKP3Q9Y446 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
PKP3Q9Y446 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.7■□□□□ 0.26
PKP3Q9Y446 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.7■□□□□ 0.26
PKP3Q9Y446 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
PKP3Q9Y446 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PKP3Q9Y446 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
PKP3Q9Y446 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PKP3Q9Y446 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.7■□□□□ 0.26
PKP3Q9Y446 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PKP3Q9Y446 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PKP3Q9Y446 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
PKP3Q9Y446 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
PKP3Q9Y446 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PKP3Q9Y446 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PKP3Q9Y446 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PKP3Q9Y446 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.7■□□□□ 0.26
PKP3Q9Y446 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.7■□□□□ 0.26
PKP3Q9Y446 RNU1-129P-201ENST00000384064 167 ntBASIC16.7■□□□□ 0.26
PKP3Q9Y446 MIR574-201ENST00000385209 96 ntBASIC16.7■□□□□ 0.26
PKP3Q9Y446 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PKP3Q9Y446 PMS2P4-201ENST00000412466 1052 ntBASIC16.7■□□□□ 0.26
PKP3Q9Y446 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.7■□□□□ 0.26
PKP3Q9Y446 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms