Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RNF11Q9Y3C5 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RNF11Q9Y3C5 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RNF11Q9Y3C5 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.26■□□□□ 0.19
RNF11Q9Y3C5 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.26■□□□□ 0.19
RNF11Q9Y3C5 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF11Q9Y3C5 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF11Q9Y3C5 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.26■□□□□ 0.19
RNF11Q9Y3C5 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
RNF11Q9Y3C5 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.26■□□□□ 0.19
RNF11Q9Y3C5 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.26■□□□□ 0.19
RNF11Q9Y3C5 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF11Q9Y3C5 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF11Q9Y3C5 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.26■□□□□ 0.19
RNF11Q9Y3C5 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.26■□□□□ 0.19
RNF11Q9Y3C5 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF11Q9Y3C5 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF11Q9Y3C5 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.26■□□□□ 0.19
RNF11Q9Y3C5 HNRNPDP1-201ENST00000439535 754 ntBASIC16.26■□□□□ 0.19
RNF11Q9Y3C5 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.26■□□□□ 0.19
RNF11Q9Y3C5 FAM197Y8-203ENST00000450145 560 ntBASIC16.26■□□□□ 0.19
RNF11Q9Y3C5 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.26■□□□□ 0.19
RNF11Q9Y3C5 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
RNF11Q9Y3C5 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.26■□□□□ 0.19
RNF11Q9Y3C5 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.26■□□□□ 0.19
RNF11Q9Y3C5 AC104640.1-201ENST00000562617 2109 ntBASIC16.26■□□□□ 0.19
RNF11Q9Y3C5 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RNF11Q9Y3C5 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF11Q9Y3C5 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.26■□□□□ 0.19
RNF11Q9Y3C5 AL671710.1-201ENST00000610245 2349 ntBASIC16.26■□□□□ 0.19
RNF11Q9Y3C5 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF11Q9Y3C5 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.26■□□□□ 0.19
RNF11Q9Y3C5 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF11Q9Y3C5 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RNF11Q9Y3C5 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
RNF11Q9Y3C5 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RNF11Q9Y3C5 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.26■□□□□ 0.19
RNF11Q9Y3C5 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
RNF11Q9Y3C5 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF11Q9Y3C5 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF11Q9Y3C5 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
RNF11Q9Y3C5 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF11Q9Y3C5 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RNF11Q9Y3C5 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.25■□□□□ 0.19
RNF11Q9Y3C5 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
RNF11Q9Y3C5 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF11Q9Y3C5 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.25■□□□□ 0.19
RNF11Q9Y3C5 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.25■□□□□ 0.19
RNF11Q9Y3C5 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RNF11Q9Y3C5 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
RNF11Q9Y3C5 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF11Q9Y3C5 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF11Q9Y3C5 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.25■□□□□ 0.19
RNF11Q9Y3C5 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.25■□□□□ 0.19
RNF11Q9Y3C5 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.25■□□□□ 0.19
RNF11Q9Y3C5 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.25■□□□□ 0.19
RNF11Q9Y3C5 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.25■□□□□ 0.19
RNF11Q9Y3C5 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.25■□□□□ 0.19
RNF11Q9Y3C5 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.25■□□□□ 0.19
RNF11Q9Y3C5 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.25■□□□□ 0.19
RNF11Q9Y3C5 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.25■□□□□ 0.19
RNF11Q9Y3C5 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.25■□□□□ 0.19
RNF11Q9Y3C5 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF11Q9Y3C5 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF11Q9Y3C5 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
RNF11Q9Y3C5 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
RNF11Q9Y3C5 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF11Q9Y3C5 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
RNF11Q9Y3C5 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RNF11Q9Y3C5 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RNF11Q9Y3C5 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RNF11Q9Y3C5 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.25■□□□□ 0.19
RNF11Q9Y3C5 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF11Q9Y3C5 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF11Q9Y3C5 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF11Q9Y3C5 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF11Q9Y3C5 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RNF11Q9Y3C5 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF11Q9Y3C5 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF11Q9Y3C5 AC092384.3-202ENST00000564646 2873 ntBASIC16.24■□□□□ 0.19
RNF11Q9Y3C5 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RNF11Q9Y3C5 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF11Q9Y3C5 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF11Q9Y3C5 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RNF11Q9Y3C5 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RNF11Q9Y3C5 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.24■□□□□ 0.19
RNF11Q9Y3C5 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.24■□□□□ 0.19
RNF11Q9Y3C5 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF11Q9Y3C5 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.24■□□□□ 0.19
RNF11Q9Y3C5 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF11Q9Y3C5 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
RNF11Q9Y3C5 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF11Q9Y3C5 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
RNF11Q9Y3C5 PMS2P1-201ENST00000431037 1228 ntBASIC16.24■□□□□ 0.19
RNF11Q9Y3C5 AC136632.2-201ENST00000512891 861 ntBASIC16.24■□□□□ 0.19
RNF11Q9Y3C5 AC107918.2-201ENST00000530817 355 ntBASIC16.24■□□□□ 0.19
RNF11Q9Y3C5 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.24■□□□□ 0.19
RNF11Q9Y3C5 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.24■□□□□ 0.19
RNF11Q9Y3C5 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.24■□□□□ 0.19
RNF11Q9Y3C5 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms