Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
POLR1DQ9Y2S0 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
POLR1DQ9Y2S0 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
POLR1DQ9Y2S0 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
POLR1DQ9Y2S0 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
POLR1DQ9Y2S0 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
POLR1DQ9Y2S0 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.92□□□□□ -0.02
POLR1DQ9Y2S0 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC14.92□□□□□ -0.02
POLR1DQ9Y2S0 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
POLR1DQ9Y2S0 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC14.92□□□□□ -0.02
POLR1DQ9Y2S0 AC021087.4-201ENST00000563761 564 ntBASIC14.92□□□□□ -0.02
POLR1DQ9Y2S0 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
POLR1DQ9Y2S0 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC14.92□□□□□ -0.02
POLR1DQ9Y2S0 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC14.92□□□□□ -0.02
POLR1DQ9Y2S0 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC14.92□□□□□ -0.02
POLR1DQ9Y2S0 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
POLR1DQ9Y2S0 AC004706.3-202ENST00000621574 984 ntBASIC14.92□□□□□ -0.02
POLR1DQ9Y2S0 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
POLR1DQ9Y2S0 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
POLR1DQ9Y2S0 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.92□□□□□ -0.02
POLR1DQ9Y2S0 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.92□□□□□ -0.02
POLR1DQ9Y2S0 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
POLR1DQ9Y2S0 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
POLR1DQ9Y2S0 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
POLR1DQ9Y2S0 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
POLR1DQ9Y2S0 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
POLR1DQ9Y2S0 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.92□□□□□ -0.02
POLR1DQ9Y2S0 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
POLR1DQ9Y2S0 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
POLR1DQ9Y2S0 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
POLR1DQ9Y2S0 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
POLR1DQ9Y2S0 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC14.92□□□□□ -0.02
POLR1DQ9Y2S0 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.92□□□□□ -0.02
POLR1DQ9Y2S0 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.92□□□□□ -0.02
POLR1DQ9Y2S0 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
POLR1DQ9Y2S0 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.92□□□□□ -0.02
POLR1DQ9Y2S0 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
POLR1DQ9Y2S0 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
POLR1DQ9Y2S0 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
POLR1DQ9Y2S0 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.91□□□□□ -0.02
POLR1DQ9Y2S0 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
POLR1DQ9Y2S0 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
POLR1DQ9Y2S0 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
POLR1DQ9Y2S0 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC14.91□□□□□ -0.02
POLR1DQ9Y2S0 PCDHB19P-201ENST00000570871 2371 ntBASIC14.91□□□□□ -0.02
POLR1DQ9Y2S0 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC14.91□□□□□ -0.02
POLR1DQ9Y2S0 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
POLR1DQ9Y2S0 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.91□□□□□ -0.02
POLR1DQ9Y2S0 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.91□□□□□ -0.02
POLR1DQ9Y2S0 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
POLR1DQ9Y2S0 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
POLR1DQ9Y2S0 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
POLR1DQ9Y2S0 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC14.91□□□□□ -0.02
POLR1DQ9Y2S0 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
POLR1DQ9Y2S0 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
POLR1DQ9Y2S0 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC14.91□□□□□ -0.02
POLR1DQ9Y2S0 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
POLR1DQ9Y2S0 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.91□□□□□ -0.02
POLR1DQ9Y2S0 ARTN-206ENST00000472435 402 ntTSL 3 BASIC14.91□□□□□ -0.02
POLR1DQ9Y2S0 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.91□□□□□ -0.02
POLR1DQ9Y2S0 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC14.91□□□□□ -0.02
POLR1DQ9Y2S0 AF238378.1-201ENST00000526806 358 ntBASIC14.91□□□□□ -0.02
POLR1DQ9Y2S0 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.91□□□□□ -0.02
POLR1DQ9Y2S0 DUX4L17-201ENST00000557360 1267 ntBASIC14.91□□□□□ -0.02
POLR1DQ9Y2S0 AC025062.2-201ENST00000605477 670 ntBASIC14.91□□□□□ -0.02
POLR1DQ9Y2S0 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC14.91□□□□□ -0.02
POLR1DQ9Y2S0 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
POLR1DQ9Y2S0 MIR1199-201ENST00000621445 119 ntBASIC14.91□□□□□ -0.02
POLR1DQ9Y2S0 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
POLR1DQ9Y2S0 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.91□□□□□ -0.02
POLR1DQ9Y2S0 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
POLR1DQ9Y2S0 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
POLR1DQ9Y2S0 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
POLR1DQ9Y2S0 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
POLR1DQ9Y2S0 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
POLR1DQ9Y2S0 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
POLR1DQ9Y2S0 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
POLR1DQ9Y2S0 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.91□□□□□ -0.02
POLR1DQ9Y2S0 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
POLR1DQ9Y2S0 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
POLR1DQ9Y2S0 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
POLR1DQ9Y2S0 TSPY26P-202ENST00000565928 3884 ntBASIC14.91□□□□□ -0.02
POLR1DQ9Y2S0 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
POLR1DQ9Y2S0 PCDHA3-202ENST00000532566 4594 ntBASIC14.9□□□□□ -0.02
POLR1DQ9Y2S0 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
POLR1DQ9Y2S0 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.9□□□□□ -0.02
POLR1DQ9Y2S0 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.9□□□□□ -0.02
POLR1DQ9Y2S0 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
POLR1DQ9Y2S0 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
POLR1DQ9Y2S0 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
POLR1DQ9Y2S0 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.9□□□□□ -0.02
POLR1DQ9Y2S0 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
POLR1DQ9Y2S0 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
POLR1DQ9Y2S0 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
POLR1DQ9Y2S0 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC14.9□□□□□ -0.02
POLR1DQ9Y2S0 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
POLR1DQ9Y2S0 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC14.9□□□□□ -0.02
POLR1DQ9Y2S0 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
POLR1DQ9Y2S0 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC14.9□□□□□ -0.02
POLR1DQ9Y2S0 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms