Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC15.88■□□□□ 0.13
LRCH1Q9Y2L9 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LRCH1Q9Y2L9 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LRCH1Q9Y2L9 AC010653.2-201ENST00000623505 997 ntBASIC15.88■□□□□ 0.13
LRCH1Q9Y2L9 AC092865.7-201ENST00000641832 219 ntBASIC15.88■□□□□ 0.13
LRCH1Q9Y2L9 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRCH1Q9Y2L9 AC112504.1-201ENST00000623415 1841 ntBASIC15.88■□□□□ 0.13
LRCH1Q9Y2L9 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRCH1Q9Y2L9 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LRCH1Q9Y2L9 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
LRCH1Q9Y2L9 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LRCH1Q9Y2L9 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRCH1Q9Y2L9 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRCH1Q9Y2L9 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
LRCH1Q9Y2L9 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRCH1Q9Y2L9 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRCH1Q9Y2L9 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.88■□□□□ 0.13
LRCH1Q9Y2L9 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
LRCH1Q9Y2L9 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LRCH1Q9Y2L9 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.88■□□□□ 0.13
LRCH1Q9Y2L9 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRCH1Q9Y2L9 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.88■□□□□ 0.13
LRCH1Q9Y2L9 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRCH1Q9Y2L9 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.88■□□□□ 0.13
LRCH1Q9Y2L9 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
LRCH1Q9Y2L9 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRCH1Q9Y2L9 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRCH1Q9Y2L9 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
LRCH1Q9Y2L9 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRCH1Q9Y2L9 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC15.87■□□□□ 0.13
LRCH1Q9Y2L9 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.87■□□□□ 0.13
LRCH1Q9Y2L9 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
LRCH1Q9Y2L9 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.87■□□□□ 0.13
LRCH1Q9Y2L9 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LRCH1Q9Y2L9 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRCH1Q9Y2L9 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
LRCH1Q9Y2L9 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
LRCH1Q9Y2L9 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LRCH1Q9Y2L9 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.87■□□□□ 0.13
LRCH1Q9Y2L9 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRCH1Q9Y2L9 RCN1P1-201ENST00000400413 996 ntBASIC15.87■□□□□ 0.13
LRCH1Q9Y2L9 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LRCH1Q9Y2L9 LIN28AP1-201ENST00000429574 405 ntBASIC15.87■□□□□ 0.13
LRCH1Q9Y2L9 AL137013.1-201ENST00000432946 1228 ntBASIC15.87■□□□□ 0.13
LRCH1Q9Y2L9 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
LRCH1Q9Y2L9 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.87■□□□□ 0.13
LRCH1Q9Y2L9 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC15.87■□□□□ 0.13
LRCH1Q9Y2L9 GPX4-207ENST00000589115 812 ntTSL 2 BASIC15.87■□□□□ 0.13
LRCH1Q9Y2L9 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC15.87■□□□□ 0.13
LRCH1Q9Y2L9 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRCH1Q9Y2L9 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.87■□□□□ 0.13
LRCH1Q9Y2L9 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LRCH1Q9Y2L9 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
LRCH1Q9Y2L9 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LRCH1Q9Y2L9 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRCH1Q9Y2L9 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRCH1Q9Y2L9 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
LRCH1Q9Y2L9 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LRCH1Q9Y2L9 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRCH1Q9Y2L9 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
LRCH1Q9Y2L9 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.87■□□□□ 0.13
LRCH1Q9Y2L9 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LRCH1Q9Y2L9 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRCH1Q9Y2L9 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LRCH1Q9Y2L9 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LRCH1Q9Y2L9 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.86■□□□□ 0.13
LRCH1Q9Y2L9 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRCH1Q9Y2L9 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRCH1Q9Y2L9 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.86■□□□□ 0.13
LRCH1Q9Y2L9 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LRCH1Q9Y2L9 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LRCH1Q9Y2L9 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.86■□□□□ 0.13
LRCH1Q9Y2L9 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRCH1Q9Y2L9 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
LRCH1Q9Y2L9 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LRCH1Q9Y2L9 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
LRCH1Q9Y2L9 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRCH1Q9Y2L9 HMGA1P5-201ENST00000412453 271 ntBASIC15.86■□□□□ 0.13
LRCH1Q9Y2L9 AC026396.1-201ENST00000419388 421 ntBASIC15.86■□□□□ 0.13
LRCH1Q9Y2L9 TMPOP1-202ENST00000424642 1267 ntBASIC15.86■□□□□ 0.13
LRCH1Q9Y2L9 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRCH1Q9Y2L9 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC15.86■□□□□ 0.13
LRCH1Q9Y2L9 TK2-213ENST00000563369 882 ntTSL 5 BASIC15.86■□□□□ 0.13
LRCH1Q9Y2L9 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LRCH1Q9Y2L9 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRCH1Q9Y2L9 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
LRCH1Q9Y2L9 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.86■□□□□ 0.13
LRCH1Q9Y2L9 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRCH1Q9Y2L9 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
LRCH1Q9Y2L9 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LRCH1Q9Y2L9 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRCH1Q9Y2L9 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.86■□□□□ 0.13
LRCH1Q9Y2L9 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.86■□□□□ 0.13
LRCH1Q9Y2L9 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
LRCH1Q9Y2L9 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LRCH1Q9Y2L9 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
LRCH1Q9Y2L9 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.86■□□□□ 0.13
LRCH1Q9Y2L9 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.86■□□□□ 0.13
LRCH1Q9Y2L9 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRCH1Q9Y2L9 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms