Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 AL133215.2-201ENST00000609242 977 ntBASIC22.57■■□□□ 1.2
NINLQ9Y2I6 AL358472.5-202ENST00000641448 1267 ntBASIC22.57■■□□□ 1.2
NINLQ9Y2I6 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC22.57■■□□□ 1.2
NINLQ9Y2I6 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
NINLQ9Y2I6 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
NINLQ9Y2I6 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
NINLQ9Y2I6 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC22.57■■□□□ 1.2
NINLQ9Y2I6 AC078925.2-201ENST00000624013 1973 ntBASIC22.57■■□□□ 1.2
NINLQ9Y2I6 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
NINLQ9Y2I6 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC22.57■■□□□ 1.2
NINLQ9Y2I6 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
NINLQ9Y2I6 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
NINLQ9Y2I6 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC22.56■■□□□ 1.2
NINLQ9Y2I6 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
NINLQ9Y2I6 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC22.56■■□□□ 1.2
NINLQ9Y2I6 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC22.56■■□□□ 1.2
NINLQ9Y2I6 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC22.56■■□□□ 1.2
NINLQ9Y2I6 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
NINLQ9Y2I6 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
NINLQ9Y2I6 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
NINLQ9Y2I6 HLA-A-202ENST00000376806 1854 ntBASIC22.56■■□□□ 1.2
NINLQ9Y2I6 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
NINLQ9Y2I6 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
NINLQ9Y2I6 TSPY16P-201ENST00000449843 468 ntBASIC22.56■■□□□ 1.2
NINLQ9Y2I6 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
NINLQ9Y2I6 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
NINLQ9Y2I6 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC22.56■■□□□ 1.2
NINLQ9Y2I6 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC22.56■■□□□ 1.2
NINLQ9Y2I6 RAB34-223ENST00000636154 730 ntTSL 2 BASIC22.56■■□□□ 1.2
NINLQ9Y2I6 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
NINLQ9Y2I6 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
NINLQ9Y2I6 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
NINLQ9Y2I6 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC22.56■■□□□ 1.2
NINLQ9Y2I6 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
NINLQ9Y2I6 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
NINLQ9Y2I6 WAC-202ENST00000347934 2839 ntTSL 5 BASIC22.56■■□□□ 1.2
NINLQ9Y2I6 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
NINLQ9Y2I6 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
NINLQ9Y2I6 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC22.56■■□□□ 1.2
NINLQ9Y2I6 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
NINLQ9Y2I6 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
NINLQ9Y2I6 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
NINLQ9Y2I6 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC22.55■■□□□ 1.2
NINLQ9Y2I6 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC22.55■■□□□ 1.2
NINLQ9Y2I6 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NINLQ9Y2I6 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NINLQ9Y2I6 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NINLQ9Y2I6 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC22.55■■□□□ 1.2
NINLQ9Y2I6 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NINLQ9Y2I6 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NINLQ9Y2I6 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC22.55■■□□□ 1.2
NINLQ9Y2I6 AC105021.1-202ENST00000570572 669 ntBASIC22.55■■□□□ 1.2
NINLQ9Y2I6 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC22.55■■□□□ 1.2
NINLQ9Y2I6 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
NINLQ9Y2I6 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NINLQ9Y2I6 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC22.55■■□□□ 1.2
NINLQ9Y2I6 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
NINLQ9Y2I6 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NINLQ9Y2I6 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
NINLQ9Y2I6 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NINLQ9Y2I6 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
NINLQ9Y2I6 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
NINLQ9Y2I6 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
NINLQ9Y2I6 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
NINLQ9Y2I6 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
NINLQ9Y2I6 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NINLQ9Y2I6 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NINLQ9Y2I6 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
NINLQ9Y2I6 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC22.54■■□□□ 1.2
NINLQ9Y2I6 UGT1A2P-201ENST00000454886 866 ntBASIC22.54■■□□□ 1.2
NINLQ9Y2I6 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
NINLQ9Y2I6 ZNF890P-202ENST00000530367 1156 ntBASIC22.54■■□□□ 1.2
NINLQ9Y2I6 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC22.54■■□□□ 1.2
NINLQ9Y2I6 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC22.54■■□□□ 1.2
NINLQ9Y2I6 TEX28P1-201ENST00000613479 1221 ntBASIC22.54■■□□□ 1.2
NINLQ9Y2I6 TEX28P2-201ENST00000617764 1221 ntBASIC22.54■■□□□ 1.2
NINLQ9Y2I6 LINC01144-201ENST00000626198 1710 ntBASIC22.54■■□□□ 1.2
NINLQ9Y2I6 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NINLQ9Y2I6 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
NINLQ9Y2I6 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC22.54■■□□□ 1.2
NINLQ9Y2I6 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
NINLQ9Y2I6 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC22.54■■□□□ 1.2
NINLQ9Y2I6 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
NINLQ9Y2I6 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NINLQ9Y2I6 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
NINLQ9Y2I6 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NINLQ9Y2I6 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NINLQ9Y2I6 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NINLQ9Y2I6 CETN4P-206ENST00000642099 2168 ntBASIC22.54■■□□□ 1.2
NINLQ9Y2I6 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NINLQ9Y2I6 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC22.54■■□□□ 1.2
NINLQ9Y2I6 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC22.54■■□□□ 1.2
NINLQ9Y2I6 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
NINLQ9Y2I6 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
NINLQ9Y2I6 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
NINLQ9Y2I6 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
NINLQ9Y2I6 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
NINLQ9Y2I6 MRPS18AP1-201ENST00000414458 589 ntBASIC22.53■■□□□ 1.2
NINLQ9Y2I6 AC009477.1-201ENST00000452936 217 ntBASIC22.53■■□□□ 1.2
NINLQ9Y2I6 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms