Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 AP001065.2-201ENST00000617205 644 ntBASIC25.78■■□□□ 1.72
RIMBP3Q9UFD9 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
RIMBP3Q9UFD9 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
RIMBP3Q9UFD9 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC25.78■■□□□ 1.72
RIMBP3Q9UFD9 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
RIMBP3Q9UFD9 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC25.78■■□□□ 1.72
RIMBP3Q9UFD9 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
RIMBP3Q9UFD9 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC25.77■■□□□ 1.72
RIMBP3Q9UFD9 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC25.77■■□□□ 1.72
RIMBP3Q9UFD9 AC132192.2-201ENST00000596206 1147 ntBASIC25.77■■□□□ 1.72
RIMBP3Q9UFD9 AL645939.5-201ENST00000606834 243 ntBASIC25.77■■□□□ 1.72
RIMBP3Q9UFD9 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
RIMBP3Q9UFD9 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
RIMBP3Q9UFD9 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC25.77■■□□□ 1.72
RIMBP3Q9UFD9 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
RIMBP3Q9UFD9 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC25.77■■□□□ 1.72
RIMBP3Q9UFD9 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC25.77■■□□□ 1.72
RIMBP3Q9UFD9 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC25.77■■□□□ 1.72
RIMBP3Q9UFD9 RN7SL774P-201ENST00000577467 290 ntBASIC25.77■■□□□ 1.72
RIMBP3Q9UFD9 DGAT2L7P-201ENST00000602462 744 ntBASIC25.77■■□□□ 1.72
RIMBP3Q9UFD9 YRDCP1-201ENST00000621419 643 ntBASIC25.77■■□□□ 1.72
RIMBP3Q9UFD9 AC009084.3-201ENST00000623356 437 ntBASIC25.77■■□□□ 1.72
RIMBP3Q9UFD9 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC25.77■■□□□ 1.72
RIMBP3Q9UFD9 AC135776.1-201ENST00000319817 2481 ntBASIC25.76■■□□□ 1.71
RIMBP3Q9UFD9 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC25.76■■□□□ 1.71
RIMBP3Q9UFD9 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
RIMBP3Q9UFD9 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
RIMBP3Q9UFD9 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC25.76■■□□□ 1.71
RIMBP3Q9UFD9 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC25.76■■□□□ 1.71
RIMBP3Q9UFD9 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC25.76■■□□□ 1.71
RIMBP3Q9UFD9 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC25.76■■□□□ 1.71
RIMBP3Q9UFD9 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC25.76■■□□□ 1.71
RIMBP3Q9UFD9 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC25.76■■□□□ 1.71
RIMBP3Q9UFD9 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
RIMBP3Q9UFD9 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC25.76■■□□□ 1.71
RIMBP3Q9UFD9 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC25.76■■□□□ 1.71
RIMBP3Q9UFD9 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC25.76■■□□□ 1.71
RIMBP3Q9UFD9 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC25.76■■□□□ 1.71
RIMBP3Q9UFD9 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC25.76■■□□□ 1.71
RIMBP3Q9UFD9 STK4-201ENST00000372801 2038 ntTSL 2 BASIC25.76■■□□□ 1.71
RIMBP3Q9UFD9 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
RIMBP3Q9UFD9 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
RIMBP3Q9UFD9 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
RIMBP3Q9UFD9 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC25.76■■□□□ 1.71
RIMBP3Q9UFD9 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC25.75■■□□□ 1.71
RIMBP3Q9UFD9 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC25.75■■□□□ 1.71
RIMBP3Q9UFD9 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
RIMBP3Q9UFD9 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC25.75■■□□□ 1.71
RIMBP3Q9UFD9 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC25.75■■□□□ 1.71
RIMBP3Q9UFD9 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC25.75■■□□□ 1.71
RIMBP3Q9UFD9 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
RIMBP3Q9UFD9 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC25.75■■□□□ 1.71
RIMBP3Q9UFD9 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
RIMBP3Q9UFD9 FAU-202ENST00000434372 533 ntTSL 2 BASIC25.75■■□□□ 1.71
RIMBP3Q9UFD9 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC25.75■■□□□ 1.71
RIMBP3Q9UFD9 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
RIMBP3Q9UFD9 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
RIMBP3Q9UFD9 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC25.75■■□□□ 1.71
RIMBP3Q9UFD9 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC25.75■■□□□ 1.71
RIMBP3Q9UFD9 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
RIMBP3Q9UFD9 EFS-203ENST00000429593 2610 ntTSL 2 BASIC25.75■■□□□ 1.71
RIMBP3Q9UFD9 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
RIMBP3Q9UFD9 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC25.75■■□□□ 1.71
RIMBP3Q9UFD9 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC25.74■■□□□ 1.71
RIMBP3Q9UFD9 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
RIMBP3Q9UFD9 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
RIMBP3Q9UFD9 AL139008.1-201ENST00000437894 228 ntBASIC25.74■■□□□ 1.71
RIMBP3Q9UFD9 AL596276.2-201ENST00000447525 331 ntBASIC25.74■■□□□ 1.71
RIMBP3Q9UFD9 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
RIMBP3Q9UFD9 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
RIMBP3Q9UFD9 WDR7-208ENST00000589935 544 ntTSL 4 BASIC25.74■■□□□ 1.71
RIMBP3Q9UFD9 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC25.74■■□□□ 1.71
RIMBP3Q9UFD9 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
RIMBP3Q9UFD9 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC25.74■■□□□ 1.71
RIMBP3Q9UFD9 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC25.74■■□□□ 1.71
RIMBP3Q9UFD9 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
RIMBP3Q9UFD9 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC25.74■■□□□ 1.71
RIMBP3Q9UFD9 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
RIMBP3Q9UFD9 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC25.74■■□□□ 1.71
RIMBP3Q9UFD9 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC25.74■■□□□ 1.71
RIMBP3Q9UFD9 AP003392.6-201ENST00000607709 325 ntBASIC25.74■■□□□ 1.71
RIMBP3Q9UFD9 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC25.74■■□□□ 1.71
RIMBP3Q9UFD9 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
RIMBP3Q9UFD9 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC25.73■■□□□ 1.71
RIMBP3Q9UFD9 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
RIMBP3Q9UFD9 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
RIMBP3Q9UFD9 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
RIMBP3Q9UFD9 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
RIMBP3Q9UFD9 AL136982.4-201ENST00000437689 1740 ntBASIC25.73■■□□□ 1.71
RIMBP3Q9UFD9 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
RIMBP3Q9UFD9 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
RIMBP3Q9UFD9 TUBBP5-203ENST00000508529 1334 ntBASIC25.73■■□□□ 1.71
RIMBP3Q9UFD9 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
RIMBP3Q9UFD9 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
RIMBP3Q9UFD9 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC25.73■■□□□ 1.71
RIMBP3Q9UFD9 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC25.73■■□□□ 1.71
RIMBP3Q9UFD9 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC25.73■■□□□ 1.71
RIMBP3Q9UFD9 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
RIMBP3Q9UFD9 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
RIMBP3Q9UFD9 NOC2LP1-201ENST00000450578 752 ntBASIC25.73■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms