Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC21.81■■□□□ 1.08
PHRF1Q9P1Y6 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PHRF1Q9P1Y6 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC21.81■■□□□ 1.08
PHRF1Q9P1Y6 AL391256.1-201ENST00000443260 1855 ntBASIC21.81■■□□□ 1.08
PHRF1Q9P1Y6 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PHRF1Q9P1Y6 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
PHRF1Q9P1Y6 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC21.81■■□□□ 1.08
PHRF1Q9P1Y6 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC21.81■■□□□ 1.08
PHRF1Q9P1Y6 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PHRF1Q9P1Y6 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PHRF1Q9P1Y6 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PHRF1Q9P1Y6 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC21.81■■□□□ 1.08
PHRF1Q9P1Y6 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PHRF1Q9P1Y6 KRT8P44-201ENST00000441609 1350 ntBASIC21.8■■□□□ 1.08
PHRF1Q9P1Y6 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC21.8■■□□□ 1.08
PHRF1Q9P1Y6 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC21.8■■□□□ 1.08
PHRF1Q9P1Y6 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PHRF1Q9P1Y6 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PHRF1Q9P1Y6 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC21.8■■□□□ 1.08
PHRF1Q9P1Y6 MIR4321-201ENST00000592276 80 ntBASIC21.8■■□□□ 1.08
PHRF1Q9P1Y6 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PHRF1Q9P1Y6 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PHRF1Q9P1Y6 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PHRF1Q9P1Y6 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.08
PHRF1Q9P1Y6 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PHRF1Q9P1Y6 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC21.8■■□□□ 1.08
PHRF1Q9P1Y6 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PHRF1Q9P1Y6 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PHRF1Q9P1Y6 AMT-232ENST00000636199 1546 ntTSL 5 BASIC21.8■■□□□ 1.08
PHRF1Q9P1Y6 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC21.8■■□□□ 1.08
PHRF1Q9P1Y6 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PHRF1Q9P1Y6 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC21.8■■□□□ 1.08
PHRF1Q9P1Y6 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
PHRF1Q9P1Y6 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC21.8■■□□□ 1.08
PHRF1Q9P1Y6 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PHRF1Q9P1Y6 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PHRF1Q9P1Y6 USB1-202ENST00000423271 1217 ntTSL 2 BASIC21.8■■□□□ 1.08
PHRF1Q9P1Y6 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC21.8■■□□□ 1.08
PHRF1Q9P1Y6 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PHRF1Q9P1Y6 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC21.8■■□□□ 1.08
PHRF1Q9P1Y6 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
PHRF1Q9P1Y6 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC21.8■■□□□ 1.08
PHRF1Q9P1Y6 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
PHRF1Q9P1Y6 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PHRF1Q9P1Y6 GGT3P-204ENST00000453783 1664 ntBASIC21.79■■□□□ 1.08
PHRF1Q9P1Y6 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
PHRF1Q9P1Y6 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PHRF1Q9P1Y6 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC21.79■■□□□ 1.08
PHRF1Q9P1Y6 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PHRF1Q9P1Y6 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
PHRF1Q9P1Y6 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
PHRF1Q9P1Y6 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
PHRF1Q9P1Y6 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PHRF1Q9P1Y6 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PHRF1Q9P1Y6 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PHRF1Q9P1Y6 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
PHRF1Q9P1Y6 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC21.79■■□□□ 1.08
PHRF1Q9P1Y6 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC21.79■■□□□ 1.08
PHRF1Q9P1Y6 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC21.79■■□□□ 1.08
PHRF1Q9P1Y6 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PHRF1Q9P1Y6 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PHRF1Q9P1Y6 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PHRF1Q9P1Y6 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PHRF1Q9P1Y6 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC21.78■■□□□ 1.08
PHRF1Q9P1Y6 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PHRF1Q9P1Y6 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC21.78■■□□□ 1.08
PHRF1Q9P1Y6 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC21.78■■□□□ 1.08
PHRF1Q9P1Y6 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC21.78■■□□□ 1.08
PHRF1Q9P1Y6 MIR6787-201ENST00000616675 61 ntBASIC21.78■■□□□ 1.08
PHRF1Q9P1Y6 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PHRF1Q9P1Y6 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PHRF1Q9P1Y6 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
PHRF1Q9P1Y6 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
PHRF1Q9P1Y6 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC21.78■■□□□ 1.08
PHRF1Q9P1Y6 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC21.78■■□□□ 1.08
PHRF1Q9P1Y6 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC21.78■■□□□ 1.08
PHRF1Q9P1Y6 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC21.78■■□□□ 1.08
PHRF1Q9P1Y6 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PHRF1Q9P1Y6 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PHRF1Q9P1Y6 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
PHRF1Q9P1Y6 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PHRF1Q9P1Y6 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PHRF1Q9P1Y6 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC21.77■■□□□ 1.08
PHRF1Q9P1Y6 MPV17-206ENST00000402722 827 ntTSL 3 BASIC21.77■■□□□ 1.08
PHRF1Q9P1Y6 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC21.77■■□□□ 1.08
PHRF1Q9P1Y6 KRT43P-201ENST00000434019 910 ntBASIC21.77■■□□□ 1.08
PHRF1Q9P1Y6 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC21.77■■□□□ 1.08
PHRF1Q9P1Y6 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC21.77■■□□□ 1.08
PHRF1Q9P1Y6 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC21.77■■□□□ 1.08
PHRF1Q9P1Y6 PIGL-212ENST00000581006 554 ntTSL 4 BASIC21.77■■□□□ 1.08
PHRF1Q9P1Y6 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC21.77■■□□□ 1.08
PHRF1Q9P1Y6 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PHRF1Q9P1Y6 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
PHRF1Q9P1Y6 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC21.77■■□□□ 1.08
PHRF1Q9P1Y6 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC21.77■■□□□ 1.08
PHRF1Q9P1Y6 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
PHRF1Q9P1Y6 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC21.77■■□□□ 1.08
PHRF1Q9P1Y6 TUBB1P2-201ENST00000422712 1306 ntBASIC21.77■■□□□ 1.08
PHRF1Q9P1Y6 TUBB1P1-201ENST00000503144 1300 ntBASIC21.77■■□□□ 1.08
PHRF1Q9P1Y6 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms