Protein–RNA interactions for Protein: Q9NRL3

STRN4, Striatin-4, humanhuman

Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STRN4Q9NRL3 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
STRN4Q9NRL3 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
STRN4Q9NRL3 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
STRN4Q9NRL3 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
STRN4Q9NRL3 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
STRN4Q9NRL3 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
STRN4Q9NRL3 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
STRN4Q9NRL3 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC21.79■■□□□ 1.08
STRN4Q9NRL3 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
STRN4Q9NRL3 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
STRN4Q9NRL3 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC21.79■■□□□ 1.08
STRN4Q9NRL3 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
STRN4Q9NRL3 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
STRN4Q9NRL3 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
STRN4Q9NRL3 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
STRN4Q9NRL3 SNX33P1-201ENST00000592116 1762 ntBASIC21.79■■□□□ 1.08
STRN4Q9NRL3 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC21.79■■□□□ 1.08
STRN4Q9NRL3 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC21.79■■□□□ 1.08
STRN4Q9NRL3 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
STRN4Q9NRL3 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC21.78■■□□□ 1.08
STRN4Q9NRL3 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
STRN4Q9NRL3 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
STRN4Q9NRL3 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC21.78■■□□□ 1.08
STRN4Q9NRL3 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
STRN4Q9NRL3 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
STRN4Q9NRL3 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC21.78■■□□□ 1.08
STRN4Q9NRL3 AC018665.1-201ENST00000622927 1362 ntBASIC21.78■■□□□ 1.08
STRN4Q9NRL3 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
STRN4Q9NRL3 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
STRN4Q9NRL3 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
STRN4Q9NRL3 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC21.78■■□□□ 1.08
STRN4Q9NRL3 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC21.78■■□□□ 1.08
STRN4Q9NRL3 AL583810.1-201ENST00000553344 1045 ntBASIC21.78■■□□□ 1.08
STRN4Q9NRL3 PIGL-212ENST00000581006 554 ntTSL 4 BASIC21.78■■□□□ 1.08
STRN4Q9NRL3 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC21.78■■□□□ 1.08
STRN4Q9NRL3 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC21.78■■□□□ 1.08
STRN4Q9NRL3 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
STRN4Q9NRL3 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
STRN4Q9NRL3 MIR6869-201ENST00000619434 62 ntBASIC21.78■■□□□ 1.08
STRN4Q9NRL3 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
STRN4Q9NRL3 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
STRN4Q9NRL3 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC21.78■■□□□ 1.08
STRN4Q9NRL3 KRT8P39-201ENST00000396270 1433 ntBASIC21.78■■□□□ 1.08
STRN4Q9NRL3 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC21.78■■□□□ 1.08
STRN4Q9NRL3 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
STRN4Q9NRL3 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC21.78■■□□□ 1.08
STRN4Q9NRL3 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
STRN4Q9NRL3 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC21.78■■□□□ 1.08
STRN4Q9NRL3 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
STRN4Q9NRL3 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
STRN4Q9NRL3 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
STRN4Q9NRL3 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC21.77■■□□□ 1.08
STRN4Q9NRL3 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
STRN4Q9NRL3 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC21.77■■□□□ 1.08
STRN4Q9NRL3 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
STRN4Q9NRL3 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
STRN4Q9NRL3 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
STRN4Q9NRL3 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
STRN4Q9NRL3 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
STRN4Q9NRL3 AL589702.1-201ENST00000641229 1509 ntBASIC21.77■■□□□ 1.08
STRN4Q9NRL3 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
STRN4Q9NRL3 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
STRN4Q9NRL3 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
STRN4Q9NRL3 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
STRN4Q9NRL3 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
STRN4Q9NRL3 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
STRN4Q9NRL3 STX1A-203ENST00000395155 783 ntTSL 2 BASIC21.77■■□□□ 1.08
STRN4Q9NRL3 HAUS4P1-201ENST00000406739 1145 ntBASIC21.77■■□□□ 1.08
STRN4Q9NRL3 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC21.77■■□□□ 1.08
STRN4Q9NRL3 AC093724.1-201ENST00000448659 1027 ntBASIC21.77■■□□□ 1.08
STRN4Q9NRL3 CTBP2P5-201ENST00000454986 1264 ntBASIC21.77■■□□□ 1.08
STRN4Q9NRL3 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
STRN4Q9NRL3 USP32P1-208ENST00000506594 1164 ntBASIC21.77■■□□□ 1.08
STRN4Q9NRL3 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC21.77■■□□□ 1.08
STRN4Q9NRL3 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC21.77■■□□□ 1.08
STRN4Q9NRL3 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
STRN4Q9NRL3 PAM16-204ENST00000571941 674 ntTSL 3 BASIC21.77■■□□□ 1.08
STRN4Q9NRL3 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC21.77■■□□□ 1.08
STRN4Q9NRL3 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
STRN4Q9NRL3 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
STRN4Q9NRL3 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
STRN4Q9NRL3 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
STRN4Q9NRL3 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC21.77■■□□□ 1.07
STRN4Q9NRL3 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
STRN4Q9NRL3 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
STRN4Q9NRL3 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC21.77■■□□□ 1.07
STRN4Q9NRL3 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
STRN4Q9NRL3 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC21.77■■□□□ 1.07
STRN4Q9NRL3 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
STRN4Q9NRL3 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
STRN4Q9NRL3 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
STRN4Q9NRL3 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
STRN4Q9NRL3 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
STRN4Q9NRL3 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
STRN4Q9NRL3 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
STRN4Q9NRL3 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
STRN4Q9NRL3 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC21.76■■□□□ 1.07
STRN4Q9NRL3 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
STRN4Q9NRL3 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
STRN4Q9NRL3 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms