Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
TLR9Q9NR96 TUBB8P12-201ENST00000308911 1335 ntBASIC17.53■□□□□ 0.4
TLR9Q9NR96 TUBB7P-202ENST00000428444 1305 ntBASIC17.53■□□□□ 0.4
TLR9Q9NR96 TUBB8P7-204ENST00000567960 1332 ntBASIC17.53■□□□□ 0.4
TLR9Q9NR96 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TLR9Q9NR96 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TLR9Q9NR96 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TLR9Q9NR96 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TLR9Q9NR96 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
TLR9Q9NR96 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TLR9Q9NR96 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TLR9Q9NR96 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TLR9Q9NR96 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
TLR9Q9NR96 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.53■□□□□ 0.4
TLR9Q9NR96 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC17.53■□□□□ 0.4
TLR9Q9NR96 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TLR9Q9NR96 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
TLR9Q9NR96 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
TLR9Q9NR96 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
TLR9Q9NR96 DGCR5-201ENST00000399539 862 ntBASIC17.53■□□□□ 0.4
TLR9Q9NR96 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC17.53■□□□□ 0.4
TLR9Q9NR96 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.53■□□□□ 0.4
TLR9Q9NR96 RN7SL618P-201ENST00000477850 296 ntBASIC17.53■□□□□ 0.4
TLR9Q9NR96 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC17.53■□□□□ 0.4
TLR9Q9NR96 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC17.53■□□□□ 0.4
TLR9Q9NR96 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC17.53■□□□□ 0.4
TLR9Q9NR96 HILS1-202ENST00000545329 423 ntBASIC17.53■□□□□ 0.4
TLR9Q9NR96 IFT20-216ENST00000588477 774 ntTSL 5 BASIC17.53■□□□□ 0.4
TLR9Q9NR96 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.53■□□□□ 0.4
TLR9Q9NR96 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TLR9Q9NR96 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC17.53■□□□□ 0.4
TLR9Q9NR96 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.53■□□□□ 0.4
TLR9Q9NR96 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TLR9Q9NR96 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TLR9Q9NR96 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TLR9Q9NR96 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TLR9Q9NR96 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TLR9Q9NR96 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TLR9Q9NR96 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TLR9Q9NR96 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.53■□□□□ 0.4
TLR9Q9NR96 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TLR9Q9NR96 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TLR9Q9NR96 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TLR9Q9NR96 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
TLR9Q9NR96 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TLR9Q9NR96 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TLR9Q9NR96 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TLR9Q9NR96 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TLR9Q9NR96 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.52■□□□□ 0.4
TLR9Q9NR96 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
TLR9Q9NR96 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TLR9Q9NR96 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC17.52■□□□□ 0.4
TLR9Q9NR96 AC009053.2-201ENST00000563701 2365 ntBASIC17.52■□□□□ 0.4
TLR9Q9NR96 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TLR9Q9NR96 PRORSD1P-202ENST00000563365 2154 ntBASIC17.52■□□□□ 0.4
TLR9Q9NR96 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.52■□□□□ 0.4
TLR9Q9NR96 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TLR9Q9NR96 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TLR9Q9NR96 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.52■□□□□ 0.4
TLR9Q9NR96 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TLR9Q9NR96 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
TLR9Q9NR96 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TLR9Q9NR96 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TLR9Q9NR96 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
TLR9Q9NR96 INE1-201ENST00000456273 945 ntBASIC17.52■□□□□ 0.4
TLR9Q9NR96 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC17.52■□□□□ 0.4
TLR9Q9NR96 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TLR9Q9NR96 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC17.52■□□□□ 0.4
TLR9Q9NR96 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.52■□□□□ 0.4
TLR9Q9NR96 IGHV3-72-202ENST00000621503 303 ntBASIC17.52■□□□□ 0.4
TLR9Q9NR96 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TLR9Q9NR96 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TLR9Q9NR96 AC106820.2-201ENST00000563775 3264 ntBASIC17.52■□□□□ 0.4
TLR9Q9NR96 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TLR9Q9NR96 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.52■□□□□ 0.4
TLR9Q9NR96 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.52■□□□□ 0.39
TLR9Q9NR96 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
TLR9Q9NR96 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
TLR9Q9NR96 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
TLR9Q9NR96 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TLR9Q9NR96 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TLR9Q9NR96 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TLR9Q9NR96 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TLR9Q9NR96 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.51■□□□□ 0.39
TLR9Q9NR96 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
TLR9Q9NR96 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TLR9Q9NR96 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TLR9Q9NR96 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.51■□□□□ 0.39
TLR9Q9NR96 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TLR9Q9NR96 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TLR9Q9NR96 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TLR9Q9NR96 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
TLR9Q9NR96 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TLR9Q9NR96 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TLR9Q9NR96 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TLR9Q9NR96 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC17.51■□□□□ 0.39
TLR9Q9NR96 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TLR9Q9NR96 RN7SL752P-201ENST00000463779 287 ntBASIC17.51■□□□□ 0.39
TLR9Q9NR96 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC17.51■□□□□ 0.39
TLR9Q9NR96 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 513.3 ms