Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SLC52A3Q9NQ40 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC15.73■□□□□ 0.11
SLC52A3Q9NQ40 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC15.73■□□□□ 0.11
SLC52A3Q9NQ40 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.73■□□□□ 0.11
SLC52A3Q9NQ40 AC087641.1-201ENST00000557561 1021 ntBASIC15.73■□□□□ 0.11
SLC52A3Q9NQ40 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.73■□□□□ 0.11
SLC52A3Q9NQ40 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.73■□□□□ 0.11
SLC52A3Q9NQ40 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.73■□□□□ 0.11
SLC52A3Q9NQ40 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC15.73■□□□□ 0.11
SLC52A3Q9NQ40 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SLC52A3Q9NQ40 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
SLC52A3Q9NQ40 OR6D1P-202ENST00000641007 5290 ntBASIC15.73■□□□□ 0.11
SLC52A3Q9NQ40 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SLC52A3Q9NQ40 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.73■□□□□ 0.11
SLC52A3Q9NQ40 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SLC52A3Q9NQ40 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.73■□□□□ 0.11
SLC52A3Q9NQ40 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
SLC52A3Q9NQ40 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SLC52A3Q9NQ40 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC15.73■□□□□ 0.11
SLC52A3Q9NQ40 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
SLC52A3Q9NQ40 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SLC52A3Q9NQ40 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.72■□□□□ 0.11
SLC52A3Q9NQ40 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
SLC52A3Q9NQ40 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.72■□□□□ 0.11
SLC52A3Q9NQ40 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC52A3Q9NQ40 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC52A3Q9NQ40 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.72■□□□□ 0.11
SLC52A3Q9NQ40 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.72■□□□□ 0.11
SLC52A3Q9NQ40 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
SLC52A3Q9NQ40 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC52A3Q9NQ40 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.72■□□□□ 0.11
SLC52A3Q9NQ40 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC52A3Q9NQ40 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.72■□□□□ 0.11
SLC52A3Q9NQ40 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.72■□□□□ 0.11
SLC52A3Q9NQ40 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC52A3Q9NQ40 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC52A3Q9NQ40 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.72■□□□□ 0.11
SLC52A3Q9NQ40 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC52A3Q9NQ40 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC52A3Q9NQ40 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SLC52A3Q9NQ40 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC52A3Q9NQ40 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SLC52A3Q9NQ40 ELK2BP-201ENST00000415014 1224 ntBASIC15.72■□□□□ 0.11
SLC52A3Q9NQ40 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC15.72■□□□□ 0.11
SLC52A3Q9NQ40 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.72■□□□□ 0.11
SLC52A3Q9NQ40 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.72■□□□□ 0.11
SLC52A3Q9NQ40 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
SLC52A3Q9NQ40 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC52A3Q9NQ40 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.72■□□□□ 0.11
SLC52A3Q9NQ40 AC020765.3-201ENST00000613051 740 ntBASIC15.72■□□□□ 0.11
SLC52A3Q9NQ40 AL358472.4-201ENST00000633140 710 ntBASIC15.72■□□□□ 0.11
SLC52A3Q9NQ40 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC52A3Q9NQ40 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC52A3Q9NQ40 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.72■□□□□ 0.11
SLC52A3Q9NQ40 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC52A3Q9NQ40 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SLC52A3Q9NQ40 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.72■□□□□ 0.11
SLC52A3Q9NQ40 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
SLC52A3Q9NQ40 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC52A3Q9NQ40 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.72■□□□□ 0.11
SLC52A3Q9NQ40 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC52A3Q9NQ40 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.72■□□□□ 0.11
SLC52A3Q9NQ40 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.72■□□□□ 0.11
SLC52A3Q9NQ40 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC52A3Q9NQ40 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.72■□□□□ 0.11
SLC52A3Q9NQ40 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC52A3Q9NQ40 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC52A3Q9NQ40 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.72■□□□□ 0.11
SLC52A3Q9NQ40 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC52A3Q9NQ40 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.72■□□□□ 0.11
SLC52A3Q9NQ40 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SLC52A3Q9NQ40 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC52A3Q9NQ40 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SLC52A3Q9NQ40 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SLC52A3Q9NQ40 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC52A3Q9NQ40 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SLC52A3Q9NQ40 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.71■□□□□ 0.11
SLC52A3Q9NQ40 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
SLC52A3Q9NQ40 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC52A3Q9NQ40 AC008677.1-201ENST00000519230 1561 ntBASIC15.71■□□□□ 0.11
SLC52A3Q9NQ40 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SLC52A3Q9NQ40 DBET-201ENST00000630918 3363 ntBASIC15.71■□□□□ 0.11
SLC52A3Q9NQ40 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
SLC52A3Q9NQ40 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SLC52A3Q9NQ40 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC52A3Q9NQ40 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC52A3Q9NQ40 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
SLC52A3Q9NQ40 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC15.71■□□□□ 0.11
SLC52A3Q9NQ40 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC15.71■□□□□ 0.11
SLC52A3Q9NQ40 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
SLC52A3Q9NQ40 FOSL1P1-201ENST00000511041 816 ntBASIC15.71■□□□□ 0.11
SLC52A3Q9NQ40 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.71■□□□□ 0.11
SLC52A3Q9NQ40 AC025062.2-201ENST00000605477 670 ntBASIC15.71■□□□□ 0.11
SLC52A3Q9NQ40 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
SLC52A3Q9NQ40 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC52A3Q9NQ40 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
SLC52A3Q9NQ40 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.71■□□□□ 0.11
SLC52A3Q9NQ40 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SLC52A3Q9NQ40 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SLC52A3Q9NQ40 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms