Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC19.33■□□□□ 0.68
SH2D4AQ9H788 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
SH2D4AQ9H788 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SH2D4AQ9H788 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SH2D4AQ9H788 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SH2D4AQ9H788 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SH2D4AQ9H788 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SH2D4AQ9H788 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SH2D4AQ9H788 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC19.32■□□□□ 0.68
SH2D4AQ9H788 AC073439.1-201ENST00000624121 1774 ntBASIC19.32■□□□□ 0.68
SH2D4AQ9H788 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
SH2D4AQ9H788 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC19.32■□□□□ 0.68
SH2D4AQ9H788 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
SH2D4AQ9H788 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SH2D4AQ9H788 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SH2D4AQ9H788 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC19.32■□□□□ 0.68
SH2D4AQ9H788 AL512638.1-201ENST00000457493 794 ntBASIC19.32■□□□□ 0.68
SH2D4AQ9H788 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC19.32■□□□□ 0.68
SH2D4AQ9H788 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC19.32■□□□□ 0.68
SH2D4AQ9H788 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SH2D4AQ9H788 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SH2D4AQ9H788 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC19.32■□□□□ 0.68
SH2D4AQ9H788 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC19.32■□□□□ 0.68
SH2D4AQ9H788 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SH2D4AQ9H788 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
SH2D4AQ9H788 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SH2D4AQ9H788 PCDHB17P-201ENST00000539533 2393 ntBASIC19.32■□□□□ 0.68
SH2D4AQ9H788 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC19.32■□□□□ 0.68
SH2D4AQ9H788 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC19.32■□□□□ 0.68
SH2D4AQ9H788 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SH2D4AQ9H788 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SH2D4AQ9H788 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC19.31■□□□□ 0.68
SH2D4AQ9H788 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC19.31■□□□□ 0.68
SH2D4AQ9H788 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC19.31■□□□□ 0.68
SH2D4AQ9H788 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
SH2D4AQ9H788 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SH2D4AQ9H788 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SH2D4AQ9H788 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SH2D4AQ9H788 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SH2D4AQ9H788 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
SH2D4AQ9H788 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC19.31■□□□□ 0.68
SH2D4AQ9H788 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SH2D4AQ9H788 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SH2D4AQ9H788 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
SH2D4AQ9H788 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SH2D4AQ9H788 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SH2D4AQ9H788 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SH2D4AQ9H788 LHX6-205ENST00000464484 666 ntTSL 2 BASIC19.31■□□□□ 0.68
SH2D4AQ9H788 AC097493.3-201ENST00000509725 367 ntBASIC19.31■□□□□ 0.68
SH2D4AQ9H788 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC19.31■□□□□ 0.68
SH2D4AQ9H788 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SH2D4AQ9H788 AC003101.2-201ENST00000612557 442 ntBASIC19.31■□□□□ 0.68
SH2D4AQ9H788 SPTSSB-204ENST00000617024 1292 ntBASIC19.31■□□□□ 0.68
SH2D4AQ9H788 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SH2D4AQ9H788 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
SH2D4AQ9H788 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SH2D4AQ9H788 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SH2D4AQ9H788 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SH2D4AQ9H788 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC19.31■□□□□ 0.68
SH2D4AQ9H788 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
SH2D4AQ9H788 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SH2D4AQ9H788 AL391256.1-201ENST00000443260 1855 ntBASIC19.31■□□□□ 0.68
SH2D4AQ9H788 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
SH2D4AQ9H788 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SH2D4AQ9H788 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
SH2D4AQ9H788 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SH2D4AQ9H788 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SH2D4AQ9H788 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SH2D4AQ9H788 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SH2D4AQ9H788 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SH2D4AQ9H788 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SH2D4AQ9H788 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
SH2D4AQ9H788 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SH2D4AQ9H788 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SH2D4AQ9H788 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC19.3■□□□□ 0.68
SH2D4AQ9H788 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SH2D4AQ9H788 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC19.3■□□□□ 0.68
SH2D4AQ9H788 FAM220BP-201ENST00000377689 816 ntBASIC19.3■□□□□ 0.68
SH2D4AQ9H788 AL035633.1-201ENST00000406139 838 ntBASIC19.3■□□□□ 0.68
SH2D4AQ9H788 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC19.3■□□□□ 0.68
SH2D4AQ9H788 AL353705.2-201ENST00000428243 662 ntBASIC19.3■□□□□ 0.68
SH2D4AQ9H788 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC19.3■□□□□ 0.68
SH2D4AQ9H788 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC19.3■□□□□ 0.68
SH2D4AQ9H788 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SH2D4AQ9H788 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC19.3■□□□□ 0.68
SH2D4AQ9H788 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC19.3■□□□□ 0.68
SH2D4AQ9H788 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC19.3■□□□□ 0.68
SH2D4AQ9H788 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SH2D4AQ9H788 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
SH2D4AQ9H788 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SH2D4AQ9H788 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
SH2D4AQ9H788 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC19.3■□□□□ 0.68
SH2D4AQ9H788 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
SH2D4AQ9H788 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC19.3■□□□□ 0.68
SH2D4AQ9H788 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
SH2D4AQ9H788 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SH2D4AQ9H788 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
SH2D4AQ9H788 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SH2D4AQ9H788 SNX33P1-201ENST00000592116 1762 ntBASIC19.29■□□□□ 0.68
SH2D4AQ9H788 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms