Protein–RNA interactions for Protein: Q9H2C1

LHX5, LIM/homeobox protein Lhx5, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX5Q9H2C1 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.5■□□□□ 0.39
LHX5Q9H2C1 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
LHX5Q9H2C1 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.5■□□□□ 0.39
LHX5Q9H2C1 MTHFR-217ENST00000641820 1569 ntBASIC17.5■□□□□ 0.39
LHX5Q9H2C1 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LHX5Q9H2C1 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.5■□□□□ 0.39
LHX5Q9H2C1 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
LHX5Q9H2C1 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LHX5Q9H2C1 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.5■□□□□ 0.39
LHX5Q9H2C1 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
LHX5Q9H2C1 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
LHX5Q9H2C1 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LHX5Q9H2C1 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.5■□□□□ 0.39
LHX5Q9H2C1 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.5■□□□□ 0.39
LHX5Q9H2C1 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LHX5Q9H2C1 RPS8P6-201ENST00000426177 609 ntBASIC17.5■□□□□ 0.39
LHX5Q9H2C1 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LHX5Q9H2C1 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.5■□□□□ 0.39
LHX5Q9H2C1 AC112191.1-201ENST00000523689 701 ntBASIC17.5■□□□□ 0.39
LHX5Q9H2C1 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.5■□□□□ 0.39
LHX5Q9H2C1 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.5■□□□□ 0.39
LHX5Q9H2C1 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LHX5Q9H2C1 AL078644.1-201ENST00000609881 752 ntBASIC17.5■□□□□ 0.39
LHX5Q9H2C1 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.5■□□□□ 0.39
LHX5Q9H2C1 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.5■□□□□ 0.39
LHX5Q9H2C1 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
LHX5Q9H2C1 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LHX5Q9H2C1 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LHX5Q9H2C1 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
LHX5Q9H2C1 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.5■□□□□ 0.39
LHX5Q9H2C1 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LHX5Q9H2C1 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LHX5Q9H2C1 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
LHX5Q9H2C1 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LHX5Q9H2C1 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
LHX5Q9H2C1 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LHX5Q9H2C1 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LHX5Q9H2C1 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.5■□□□□ 0.39
LHX5Q9H2C1 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LHX5Q9H2C1 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LHX5Q9H2C1 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LHX5Q9H2C1 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LHX5Q9H2C1 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.49■□□□□ 0.39
LHX5Q9H2C1 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LHX5Q9H2C1 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
LHX5Q9H2C1 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.49■□□□□ 0.39
LHX5Q9H2C1 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
LHX5Q9H2C1 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
LHX5Q9H2C1 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LHX5Q9H2C1 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
LHX5Q9H2C1 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
LHX5Q9H2C1 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
LHX5Q9H2C1 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
LHX5Q9H2C1 MCCD1P2-201ENST00000423228 335 ntBASIC17.49■□□□□ 0.39
LHX5Q9H2C1 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LHX5Q9H2C1 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.49■□□□□ 0.39
LHX5Q9H2C1 KRT18P34-201ENST00000488218 1270 ntBASIC17.49■□□□□ 0.39
LHX5Q9H2C1 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
LHX5Q9H2C1 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LHX5Q9H2C1 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
LHX5Q9H2C1 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LHX5Q9H2C1 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LHX5Q9H2C1 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
LHX5Q9H2C1 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LHX5Q9H2C1 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LHX5Q9H2C1 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LHX5Q9H2C1 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
LHX5Q9H2C1 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
LHX5Q9H2C1 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LHX5Q9H2C1 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
LHX5Q9H2C1 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.49■□□□□ 0.39
LHX5Q9H2C1 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LHX5Q9H2C1 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
LHX5Q9H2C1 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.49■□□□□ 0.39
LHX5Q9H2C1 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.49■□□□□ 0.39
LHX5Q9H2C1 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LHX5Q9H2C1 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LHX5Q9H2C1 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
LHX5Q9H2C1 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
LHX5Q9H2C1 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.49■□□□□ 0.39
LHX5Q9H2C1 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LHX5Q9H2C1 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.49■□□□□ 0.39
LHX5Q9H2C1 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
LHX5Q9H2C1 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LHX5Q9H2C1 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.48■□□□□ 0.39
LHX5Q9H2C1 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LHX5Q9H2C1 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LHX5Q9H2C1 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LHX5Q9H2C1 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LHX5Q9H2C1 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.48■□□□□ 0.39
LHX5Q9H2C1 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LHX5Q9H2C1 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LHX5Q9H2C1 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
LHX5Q9H2C1 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.48■□□□□ 0.39
LHX5Q9H2C1 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.48■□□□□ 0.39
LHX5Q9H2C1 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.48■□□□□ 0.39
LHX5Q9H2C1 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.48■□□□□ 0.39
LHX5Q9H2C1 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.48■□□□□ 0.39
LHX5Q9H2C1 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
LHX5Q9H2C1 AP001160.2-201ENST00000596071 487 ntBASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms