Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.43■□□□□ 0.06
POLR2J3Q9H1A7 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
POLR2J3Q9H1A7 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
POLR2J3Q9H1A7 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
POLR2J3Q9H1A7 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
POLR2J3Q9H1A7 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
POLR2J3Q9H1A7 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
POLR2J3Q9H1A7 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.43■□□□□ 0.06
POLR2J3Q9H1A7 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.43■□□□□ 0.06
POLR2J3Q9H1A7 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.43■□□□□ 0.06
POLR2J3Q9H1A7 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.43■□□□□ 0.06
POLR2J3Q9H1A7 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC15.43■□□□□ 0.06
POLR2J3Q9H1A7 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.43■□□□□ 0.06
POLR2J3Q9H1A7 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
POLR2J3Q9H1A7 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.43■□□□□ 0.06
POLR2J3Q9H1A7 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.43■□□□□ 0.06
POLR2J3Q9H1A7 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
POLR2J3Q9H1A7 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.43■□□□□ 0.06
POLR2J3Q9H1A7 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
POLR2J3Q9H1A7 AL355877.3-201ENST00000622820 899 ntBASIC15.43■□□□□ 0.06
POLR2J3Q9H1A7 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC15.43■□□□□ 0.06
POLR2J3Q9H1A7 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
POLR2J3Q9H1A7 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.43■□□□□ 0.06
POLR2J3Q9H1A7 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
POLR2J3Q9H1A7 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
POLR2J3Q9H1A7 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
POLR2J3Q9H1A7 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
POLR2J3Q9H1A7 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.43■□□□□ 0.06
POLR2J3Q9H1A7 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
POLR2J3Q9H1A7 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
POLR2J3Q9H1A7 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.43■□□□□ 0.06
POLR2J3Q9H1A7 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
POLR2J3Q9H1A7 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
POLR2J3Q9H1A7 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.43■□□□□ 0.06
POLR2J3Q9H1A7 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
POLR2J3Q9H1A7 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
POLR2J3Q9H1A7 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
POLR2J3Q9H1A7 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
POLR2J3Q9H1A7 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.42■□□□□ 0.06
POLR2J3Q9H1A7 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.42■□□□□ 0.06
POLR2J3Q9H1A7 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
POLR2J3Q9H1A7 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
POLR2J3Q9H1A7 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
POLR2J3Q9H1A7 AC002310.6-201ENST00000624451 1377 ntBASIC15.42■□□□□ 0.06
POLR2J3Q9H1A7 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.42■□□□□ 0.06
POLR2J3Q9H1A7 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
POLR2J3Q9H1A7 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC15.42■□□□□ 0.06
POLR2J3Q9H1A7 RNF146-204ENST00000476956 884 ntTSL 2 BASIC15.42■□□□□ 0.06
POLR2J3Q9H1A7 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC15.42■□□□□ 0.06
POLR2J3Q9H1A7 MPDU1-223ENST00000582151 728 ntBASIC15.42■□□□□ 0.06
POLR2J3Q9H1A7 AL121772.3-201ENST00000610840 674 ntBASIC15.42■□□□□ 0.06
POLR2J3Q9H1A7 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC15.42■□□□□ 0.06
POLR2J3Q9H1A7 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
POLR2J3Q9H1A7 AC004706.3-202ENST00000621574 984 ntBASIC15.42■□□□□ 0.06
POLR2J3Q9H1A7 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
POLR2J3Q9H1A7 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
POLR2J3Q9H1A7 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.42■□□□□ 0.06
POLR2J3Q9H1A7 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
POLR2J3Q9H1A7 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
POLR2J3Q9H1A7 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
POLR2J3Q9H1A7 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
POLR2J3Q9H1A7 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
POLR2J3Q9H1A7 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.42■□□□□ 0.06
POLR2J3Q9H1A7 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
POLR2J3Q9H1A7 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
POLR2J3Q9H1A7 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.42■□□□□ 0.06
POLR2J3Q9H1A7 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
POLR2J3Q9H1A7 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
POLR2J3Q9H1A7 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.42■□□□□ 0.06
POLR2J3Q9H1A7 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
POLR2J3Q9H1A7 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
POLR2J3Q9H1A7 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
POLR2J3Q9H1A7 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
POLR2J3Q9H1A7 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
POLR2J3Q9H1A7 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
POLR2J3Q9H1A7 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
POLR2J3Q9H1A7 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
POLR2J3Q9H1A7 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
POLR2J3Q9H1A7 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.41■□□□□ 0.06
POLR2J3Q9H1A7 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
POLR2J3Q9H1A7 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
POLR2J3Q9H1A7 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
POLR2J3Q9H1A7 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
POLR2J3Q9H1A7 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
POLR2J3Q9H1A7 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
POLR2J3Q9H1A7 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC15.41■□□□□ 0.06
POLR2J3Q9H1A7 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.41■□□□□ 0.06
POLR2J3Q9H1A7 SCARNA2-201ENST00000458748 420 ntBASIC15.41■□□□□ 0.06
POLR2J3Q9H1A7 KRT18P35-201ENST00000510488 1269 ntBASIC15.41■□□□□ 0.06
POLR2J3Q9H1A7 FOSL1P1-201ENST00000511041 816 ntBASIC15.41■□□□□ 0.06
POLR2J3Q9H1A7 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
POLR2J3Q9H1A7 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.41■□□□□ 0.06
POLR2J3Q9H1A7 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.41■□□□□ 0.06
POLR2J3Q9H1A7 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.41■□□□□ 0.06
POLR2J3Q9H1A7 MTDHP3-201ENST00000594186 672 ntBASIC15.41■□□□□ 0.06
POLR2J3Q9H1A7 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.41■□□□□ 0.06
POLR2J3Q9H1A7 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.41■□□□□ 0.06
POLR2J3Q9H1A7 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
POLR2J3Q9H1A7 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
POLR2J3Q9H1A7 AC011270.2-201ENST00000624293 2550 ntBASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms