Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
TRIM2Q9C040 AP001350.2-201ENST00000625104 1094 ntBASIC15.35■□□□□ 0.05
TRIM2Q9C040 PGM5P2-202ENST00000637225 1043 ntBASIC15.35■□□□□ 0.05
TRIM2Q9C040 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM2Q9C040 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM2Q9C040 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM2Q9C040 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM2Q9C040 IL9RP2-201ENST00000423948 1312 ntBASIC15.35■□□□□ 0.05
TRIM2Q9C040 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
TRIM2Q9C040 TNRC18P3-201ENST00000441896 2691 ntBASIC15.35■□□□□ 0.05
TRIM2Q9C040 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM2Q9C040 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
TRIM2Q9C040 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM2Q9C040 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
TRIM2Q9C040 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
TRIM2Q9C040 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.34■□□□□ 0.05
TRIM2Q9C040 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM2Q9C040 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.34■□□□□ 0.05
TRIM2Q9C040 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM2Q9C040 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
TRIM2Q9C040 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
TRIM2Q9C040 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
TRIM2Q9C040 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM2Q9C040 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM2Q9C040 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM2Q9C040 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM2Q9C040 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM2Q9C040 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
TRIM2Q9C040 DOC2GP-204ENST00000639052 2548 ntBASIC15.34■□□□□ 0.05
TRIM2Q9C040 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.34■□□□□ 0.05
TRIM2Q9C040 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.34■□□□□ 0.05
TRIM2Q9C040 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM2Q9C040 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM2Q9C040 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
TRIM2Q9C040 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.34■□□□□ 0.05
TRIM2Q9C040 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM2Q9C040 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.34■□□□□ 0.05
TRIM2Q9C040 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
TRIM2Q9C040 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.34■□□□□ 0.05
TRIM2Q9C040 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.34■□□□□ 0.05
TRIM2Q9C040 AC093909.1-201ENST00000504731 1122 ntBASIC15.34■□□□□ 0.05
TRIM2Q9C040 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM2Q9C040 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.34■□□□□ 0.05
TRIM2Q9C040 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.34■□□□□ 0.05
TRIM2Q9C040 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.34■□□□□ 0.05
TRIM2Q9C040 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.34■□□□□ 0.05
TRIM2Q9C040 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.34■□□□□ 0.05
TRIM2Q9C040 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
TRIM2Q9C040 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.34■□□□□ 0.05
TRIM2Q9C040 AC005412.3-201ENST00000580309 715 ntBASIC15.34■□□□□ 0.05
TRIM2Q9C040 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.34■□□□□ 0.05
TRIM2Q9C040 AC008735.5-201ENST00000623544 497 ntBASIC15.34■□□□□ 0.05
TRIM2Q9C040 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.34■□□□□ 0.05
TRIM2Q9C040 ME2P1-201ENST00000426028 1970 ntBASIC15.34■□□□□ 0.05
TRIM2Q9C040 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM2Q9C040 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.34■□□□□ 0.05
TRIM2Q9C040 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
TRIM2Q9C040 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.34■□□□□ 0.05
TRIM2Q9C040 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM2Q9C040 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
TRIM2Q9C040 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM2Q9C040 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM2Q9C040 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.34■□□□□ 0.05
TRIM2Q9C040 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM2Q9C040 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.34■□□□□ 0.05
TRIM2Q9C040 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM2Q9C040 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM2Q9C040 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM2Q9C040 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.34■□□□□ 0.05
TRIM2Q9C040 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM2Q9C040 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRIM2Q9C040 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.33■□□□□ 0.05
TRIM2Q9C040 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.05
TRIM2Q9C040 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRIM2Q9C040 ALOX12P2-203ENST00000570921 1945 ntBASIC15.33■□□□□ 0.05
TRIM2Q9C040 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
TRIM2Q9C040 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM2Q9C040 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM2Q9C040 RPS2P28-201ENST00000314255 741 ntBASIC15.33■□□□□ 0.04
TRIM2Q9C040 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
TRIM2Q9C040 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.33■□□□□ 0.04
TRIM2Q9C040 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM2Q9C040 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.33■□□□□ 0.04
TRIM2Q9C040 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.33■□□□□ 0.04
TRIM2Q9C040 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.33■□□□□ 0.04
TRIM2Q9C040 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.33■□□□□ 0.04
TRIM2Q9C040 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.33■□□□□ 0.04
TRIM2Q9C040 AC008667.4-201ENST00000607370 168 ntBASIC15.33■□□□□ 0.04
TRIM2Q9C040 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM2Q9C040 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.33■□□□□ 0.04
TRIM2Q9C040 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM2Q9C040 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM2Q9C040 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM2Q9C040 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
TRIM2Q9C040 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM2Q9C040 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.33■□□□□ 0.04
TRIM2Q9C040 SNX33P1-201ENST00000592116 1762 ntBASIC15.33■□□□□ 0.04
TRIM2Q9C040 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
TRIM2Q9C040 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM2Q9C040 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms