Protein–RNA interactions for Protein: Q9BQY4

RHOXF2, Rhox homeobox family member 2, humanhuman

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOXF2Q9BQY4 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RHOXF2Q9BQY4 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RHOXF2Q9BQY4 MIR662-201ENST00000384847 95 ntBASIC17.58■□□□□ 0.4
RHOXF2Q9BQY4 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.58■□□□□ 0.4
RHOXF2Q9BQY4 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
RHOXF2Q9BQY4 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
RHOXF2Q9BQY4 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.58■□□□□ 0.4
RHOXF2Q9BQY4 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
RHOXF2Q9BQY4 AC140113.3-201ENST00000605663 199 ntBASIC17.58■□□□□ 0.4
RHOXF2Q9BQY4 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.58■□□□□ 0.4
RHOXF2Q9BQY4 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.58■□□□□ 0.4
RHOXF2Q9BQY4 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC17.58■□□□□ 0.4
RHOXF2Q9BQY4 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RHOXF2Q9BQY4 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.4
RHOXF2Q9BQY4 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RHOXF2Q9BQY4 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RHOXF2Q9BQY4 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RHOXF2Q9BQY4 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RHOXF2Q9BQY4 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
RHOXF2Q9BQY4 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
RHOXF2Q9BQY4 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RHOXF2Q9BQY4 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC17.57■□□□□ 0.4
RHOXF2Q9BQY4 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RHOXF2Q9BQY4 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RHOXF2Q9BQY4 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.57■□□□□ 0.4
RHOXF2Q9BQY4 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RHOXF2Q9BQY4 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RHOXF2Q9BQY4 AC002310.6-201ENST00000624451 1377 ntBASIC17.57■□□□□ 0.4
RHOXF2Q9BQY4 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RHOXF2Q9BQY4 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RHOXF2Q9BQY4 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC17.57■□□□□ 0.4
RHOXF2Q9BQY4 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
RHOXF2Q9BQY4 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RHOXF2Q9BQY4 AC132938.5-201ENST00000624980 1813 ntBASIC17.57■□□□□ 0.4
RHOXF2Q9BQY4 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RHOXF2Q9BQY4 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC17.57■□□□□ 0.4
RHOXF2Q9BQY4 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RHOXF2Q9BQY4 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RHOXF2Q9BQY4 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RHOXF2Q9BQY4 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.57■□□□□ 0.4
RHOXF2Q9BQY4 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RHOXF2Q9BQY4 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RHOXF2Q9BQY4 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.57■□□□□ 0.4
RHOXF2Q9BQY4 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
RHOXF2Q9BQY4 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.57■□□□□ 0.4
RHOXF2Q9BQY4 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.57■□□□□ 0.4
RHOXF2Q9BQY4 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
RHOXF2Q9BQY4 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
RHOXF2Q9BQY4 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RHOXF2Q9BQY4 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
RHOXF2Q9BQY4 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RHOXF2Q9BQY4 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.57■□□□□ 0.4
RHOXF2Q9BQY4 CDC14C-201ENST00000428251 1719 ntBASIC17.57■□□□□ 0.4
RHOXF2Q9BQY4 AP003680.1-201ENST00000598970 3660 ntBASIC17.57■□□□□ 0.4
RHOXF2Q9BQY4 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RHOXF2Q9BQY4 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.57■□□□□ 0.4
RHOXF2Q9BQY4 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
RHOXF2Q9BQY4 LINC02447-202ENST00000501888 2146 ntBASIC17.57■□□□□ 0.4
RHOXF2Q9BQY4 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.57■□□□□ 0.4
RHOXF2Q9BQY4 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RHOXF2Q9BQY4 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RHOXF2Q9BQY4 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RHOXF2Q9BQY4 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC17.57■□□□□ 0.4
RHOXF2Q9BQY4 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RHOXF2Q9BQY4 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
RHOXF2Q9BQY4 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RHOXF2Q9BQY4 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RHOXF2Q9BQY4 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.56■□□□□ 0.4
RHOXF2Q9BQY4 AL009178.2-201ENST00000597278 2719 ntBASIC17.56■□□□□ 0.4
RHOXF2Q9BQY4 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RHOXF2Q9BQY4 REXO1L8P-201ENST00000604378 1897 ntBASIC17.56■□□□□ 0.4
RHOXF2Q9BQY4 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
RHOXF2Q9BQY4 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RHOXF2Q9BQY4 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RHOXF2Q9BQY4 AC112504.1-201ENST00000623415 1841 ntBASIC17.56■□□□□ 0.4
RHOXF2Q9BQY4 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RHOXF2Q9BQY4 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RHOXF2Q9BQY4 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
RHOXF2Q9BQY4 TPO-203ENST00000346956 2923 ntTSL 5 BASIC17.56■□□□□ 0.4
RHOXF2Q9BQY4 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC17.56■□□□□ 0.4
RHOXF2Q9BQY4 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RHOXF2Q9BQY4 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RHOXF2Q9BQY4 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RHOXF2Q9BQY4 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RHOXF2Q9BQY4 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RHOXF2Q9BQY4 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.56■□□□□ 0.4
RHOXF2Q9BQY4 FAM220CP-201ENST00000395253 831 ntBASIC17.56■□□□□ 0.4
RHOXF2Q9BQY4 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
RHOXF2Q9BQY4 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RHOXF2Q9BQY4 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.56■□□□□ 0.4
RHOXF2Q9BQY4 AL390719.2-201ENST00000606993 987 ntBASIC17.56■□□□□ 0.4
RHOXF2Q9BQY4 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.56■□□□□ 0.4
RHOXF2Q9BQY4 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.56■□□□□ 0.4
RHOXF2Q9BQY4 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.56■□□□□ 0.4
RHOXF2Q9BQY4 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.56■□□□□ 0.4
RHOXF2Q9BQY4 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RHOXF2Q9BQY4 AC006277.1-201ENST00000624348 1610 ntBASIC17.56■□□□□ 0.4
RHOXF2Q9BQY4 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RHOXF2Q9BQY4 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RHOXF2Q9BQY4 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms