Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NDNQ99608 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
NDNQ99608 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NDNQ99608 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NDNQ99608 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NDNQ99608 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
NDNQ99608 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.74■□□□□ 0.27
NDNQ99608 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.74■□□□□ 0.27
NDNQ99608 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NDNQ99608 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.74■□□□□ 0.27
NDNQ99608 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
NDNQ99608 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NDNQ99608 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NDNQ99608 AC006538.1-201ENST00000567905 1585 ntBASIC16.74■□□□□ 0.27
NDNQ99608 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
NDNQ99608 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.74■□□□□ 0.27
NDNQ99608 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NDNQ99608 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NDNQ99608 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NDNQ99608 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.74■□□□□ 0.27
NDNQ99608 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.74■□□□□ 0.27
NDNQ99608 SLC25A6P2-201ENST00000497974 877 ntBASIC16.74■□□□□ 0.27
NDNQ99608 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.74■□□□□ 0.27
NDNQ99608 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.74■□□□□ 0.27
NDNQ99608 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.74■□□□□ 0.27
NDNQ99608 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
NDNQ99608 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
NDNQ99608 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.74■□□□□ 0.27
NDNQ99608 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NDNQ99608 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
NDNQ99608 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NDNQ99608 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
NDNQ99608 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.74■□□□□ 0.27
NDNQ99608 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
NDNQ99608 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NDNQ99608 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
NDNQ99608 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NDNQ99608 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.74■□□□□ 0.27
NDNQ99608 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NDNQ99608 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NDNQ99608 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
NDNQ99608 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NDNQ99608 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NDNQ99608 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NDNQ99608 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
NDNQ99608 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.73■□□□□ 0.27
NDNQ99608 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NDNQ99608 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NDNQ99608 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.73■□□□□ 0.27
NDNQ99608 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
NDNQ99608 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.73■□□□□ 0.27
NDNQ99608 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NDNQ99608 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
NDNQ99608 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NDNQ99608 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NDNQ99608 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NDNQ99608 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NDNQ99608 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NDNQ99608 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NDNQ99608 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.73■□□□□ 0.27
NDNQ99608 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.73■□□□□ 0.27
NDNQ99608 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
NDNQ99608 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NDNQ99608 AC073648.2-201ENST00000510116 352 ntBASIC16.73■□□□□ 0.27
NDNQ99608 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NDNQ99608 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.73■□□□□ 0.27
NDNQ99608 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
NDNQ99608 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.73■□□□□ 0.27
NDNQ99608 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.73■□□□□ 0.27
NDNQ99608 AC006557.2-201ENST00000592985 1240 ntBASIC16.73■□□□□ 0.27
NDNQ99608 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.73■□□□□ 0.27
NDNQ99608 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NDNQ99608 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.73■□□□□ 0.27
NDNQ99608 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NDNQ99608 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.73■□□□□ 0.27
NDNQ99608 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.73■□□□□ 0.27
NDNQ99608 AL805961.1-202ENST00000641562 540 ntBASIC16.73■□□□□ 0.27
NDNQ99608 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NDNQ99608 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NDNQ99608 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NDNQ99608 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
NDNQ99608 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NDNQ99608 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NDNQ99608 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.73■□□□□ 0.27
NDNQ99608 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
NDNQ99608 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NDNQ99608 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NDNQ99608 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
NDNQ99608 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.73■□□□□ 0.27
NDNQ99608 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NDNQ99608 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NDNQ99608 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.72■□□□□ 0.27
NDNQ99608 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NDNQ99608 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NDNQ99608 AC105917.1-201ENST00000506637 2539 ntBASIC16.72■□□□□ 0.27
NDNQ99608 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
NDNQ99608 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.72■□□□□ 0.27
NDNQ99608 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.72■□□□□ 0.27
NDNQ99608 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NDNQ99608 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms