Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.22■□□□□ 0.35
HAPLN3Q96S86 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
HAPLN3Q96S86 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HAPLN3Q96S86 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HAPLN3Q96S86 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
HAPLN3Q96S86 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HAPLN3Q96S86 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HAPLN3Q96S86 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
HAPLN3Q96S86 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HAPLN3Q96S86 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.21■□□□□ 0.35
HAPLN3Q96S86 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.21■□□□□ 0.35
HAPLN3Q96S86 GGT4P-201ENST00000623672 1708 ntBASIC17.21■□□□□ 0.35
HAPLN3Q96S86 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.21■□□□□ 0.35
HAPLN3Q96S86 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
HAPLN3Q96S86 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
HAPLN3Q96S86 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HAPLN3Q96S86 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HAPLN3Q96S86 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HAPLN3Q96S86 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.21■□□□□ 0.35
HAPLN3Q96S86 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HAPLN3Q96S86 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HAPLN3Q96S86 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
HAPLN3Q96S86 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.21■□□□□ 0.35
HAPLN3Q96S86 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HAPLN3Q96S86 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HAPLN3Q96S86 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HAPLN3Q96S86 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
HAPLN3Q96S86 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
HAPLN3Q96S86 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HAPLN3Q96S86 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.21■□□□□ 0.35
HAPLN3Q96S86 FAM58CP-201ENST00000435741 640 ntBASIC17.21■□□□□ 0.35
HAPLN3Q96S86 ACTG1P14-201ENST00000446382 1122 ntBASIC17.21■□□□□ 0.35
HAPLN3Q96S86 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
HAPLN3Q96S86 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.21■□□□□ 0.35
HAPLN3Q96S86 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.21■□□□□ 0.35
HAPLN3Q96S86 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.21■□□□□ 0.35
HAPLN3Q96S86 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.21■□□□□ 0.35
HAPLN3Q96S86 AC006538.3-201ENST00000612495 578 ntBASIC17.21■□□□□ 0.35
HAPLN3Q96S86 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
HAPLN3Q96S86 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HAPLN3Q96S86 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HAPLN3Q96S86 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.21■□□□□ 0.35
HAPLN3Q96S86 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
HAPLN3Q96S86 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HAPLN3Q96S86 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.21■□□□□ 0.35
HAPLN3Q96S86 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
HAPLN3Q96S86 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HAPLN3Q96S86 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HAPLN3Q96S86 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HAPLN3Q96S86 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
HAPLN3Q96S86 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
HAPLN3Q96S86 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
HAPLN3Q96S86 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HAPLN3Q96S86 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HAPLN3Q96S86 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
HAPLN3Q96S86 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
HAPLN3Q96S86 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
HAPLN3Q96S86 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.34
HAPLN3Q96S86 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
HAPLN3Q96S86 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
HAPLN3Q96S86 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
HAPLN3Q96S86 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.21■□□□□ 0.34
HAPLN3Q96S86 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HAPLN3Q96S86 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
HAPLN3Q96S86 GPAA1P2-202ENST00000606848 1787 ntBASIC17.2■□□□□ 0.34
HAPLN3Q96S86 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HAPLN3Q96S86 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HAPLN3Q96S86 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.2■□□□□ 0.34
HAPLN3Q96S86 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HAPLN3Q96S86 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
HAPLN3Q96S86 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HAPLN3Q96S86 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HAPLN3Q96S86 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.2■□□□□ 0.34
HAPLN3Q96S86 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HAPLN3Q96S86 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.2■□□□□ 0.34
HAPLN3Q96S86 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
HAPLN3Q96S86 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HAPLN3Q96S86 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HAPLN3Q96S86 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.2■□□□□ 0.34
HAPLN3Q96S86 HTR5BP-201ENST00000430851 1154 ntBASIC17.2■□□□□ 0.34
HAPLN3Q96S86 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.2■□□□□ 0.34
HAPLN3Q96S86 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.2■□□□□ 0.34
HAPLN3Q96S86 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
HAPLN3Q96S86 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HAPLN3Q96S86 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
HAPLN3Q96S86 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
HAPLN3Q96S86 AC005829.1-201ENST00000570002 483 ntBASIC17.2■□□□□ 0.34
HAPLN3Q96S86 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.2■□□□□ 0.34
HAPLN3Q96S86 AC099522.2-201ENST00000607001 744 ntBASIC17.2■□□□□ 0.34
HAPLN3Q96S86 AC020765.3-201ENST00000613051 740 ntBASIC17.2■□□□□ 0.34
HAPLN3Q96S86 AC092902.6-201ENST00000641783 218 ntBASIC17.2■□□□□ 0.34
HAPLN3Q96S86 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HAPLN3Q96S86 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
HAPLN3Q96S86 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
HAPLN3Q96S86 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
HAPLN3Q96S86 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
HAPLN3Q96S86 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.2■□□□□ 0.34
HAPLN3Q96S86 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HAPLN3Q96S86 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.2■□□□□ 0.34
HAPLN3Q96S86 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms