Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 AD001527.2-201ENST00000622994 785 ntBASIC13.56□□□□□ -0.24
RAB40CQ96S21 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC13.56□□□□□ -0.24
RAB40CQ96S21 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC13.56□□□□□ -0.24
RAB40CQ96S21 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
RAB40CQ96S21 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RAB40CQ96S21 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
RAB40CQ96S21 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RAB40CQ96S21 AC010491.1-201ENST00000563101 2797 ntBASIC13.56□□□□□ -0.24
RAB40CQ96S21 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RAB40CQ96S21 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RAB40CQ96S21 UBC-206ENST00000538617 1303 ntTSL 5 BASIC13.56□□□□□ -0.24
RAB40CQ96S21 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RAB40CQ96S21 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC13.56□□□□□ -0.24
RAB40CQ96S21 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC13.56□□□□□ -0.24
RAB40CQ96S21 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RAB40CQ96S21 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RAB40CQ96S21 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC13.56□□□□□ -0.24
RAB40CQ96S21 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RAB40CQ96S21 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
RAB40CQ96S21 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC13.56□□□□□ -0.24
RAB40CQ96S21 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
RAB40CQ96S21 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAB40CQ96S21 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC13.55□□□□□ -0.24
RAB40CQ96S21 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAB40CQ96S21 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC13.55□□□□□ -0.24
RAB40CQ96S21 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
RAB40CQ96S21 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAB40CQ96S21 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.55□□□□□ -0.24
RAB40CQ96S21 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAB40CQ96S21 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC13.55□□□□□ -0.24
RAB40CQ96S21 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAB40CQ96S21 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAB40CQ96S21 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAB40CQ96S21 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAB40CQ96S21 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
RAB40CQ96S21 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
RAB40CQ96S21 AP005117.1-202ENST00000581724 1908 ntBASIC13.55□□□□□ -0.24
RAB40CQ96S21 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAB40CQ96S21 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAB40CQ96S21 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAB40CQ96S21 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAB40CQ96S21 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAB40CQ96S21 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAB40CQ96S21 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAB40CQ96S21 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAB40CQ96S21 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAB40CQ96S21 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAB40CQ96S21 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAB40CQ96S21 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAB40CQ96S21 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC13.55□□□□□ -0.24
RAB40CQ96S21 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAB40CQ96S21 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAB40CQ96S21 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RAB40CQ96S21 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC13.55□□□□□ -0.24
RAB40CQ96S21 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC13.55□□□□□ -0.24
RAB40CQ96S21 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RAB40CQ96S21 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC13.55□□□□□ -0.24
RAB40CQ96S21 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC13.55□□□□□ -0.24
RAB40CQ96S21 AC011840.4-201ENST00000578471 627 ntBASIC13.55□□□□□ -0.24
RAB40CQ96S21 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RAB40CQ96S21 RBM42-202ENST00000586618 771 ntTSL 3 BASIC13.55□□□□□ -0.24
RAB40CQ96S21 AC005336.2-201ENST00000593183 939 ntBASIC13.55□□□□□ -0.24
RAB40CQ96S21 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC13.55□□□□□ -0.24
RAB40CQ96S21 AC073592.5-201ENST00000624854 528 ntBASIC13.55□□□□□ -0.24
RAB40CQ96S21 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC13.55□□□□□ -0.24
RAB40CQ96S21 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAB40CQ96S21 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAB40CQ96S21 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
RAB40CQ96S21 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAB40CQ96S21 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
RAB40CQ96S21 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAB40CQ96S21 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
RAB40CQ96S21 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAB40CQ96S21 BID-213ENST00000615414 2236 ntTSL 5 BASIC13.55□□□□□ -0.24
RAB40CQ96S21 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAB40CQ96S21 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC13.55□□□□□ -0.24
RAB40CQ96S21 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
RAB40CQ96S21 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAB40CQ96S21 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RAB40CQ96S21 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAB40CQ96S21 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
RAB40CQ96S21 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
RAB40CQ96S21 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB40CQ96S21 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC13.54□□□□□ -0.24
RAB40CQ96S21 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC13.54□□□□□ -0.24
RAB40CQ96S21 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC13.54□□□□□ -0.24
RAB40CQ96S21 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB40CQ96S21 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC13.54□□□□□ -0.24
RAB40CQ96S21 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC13.54□□□□□ -0.24
RAB40CQ96S21 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB40CQ96S21 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB40CQ96S21 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB40CQ96S21 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB40CQ96S21 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC13.54□□□□□ -0.24
RAB40CQ96S21 DBET-201ENST00000630918 3363 ntBASIC13.54□□□□□ -0.24
RAB40CQ96S21 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB40CQ96S21 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB40CQ96S21 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC13.54□□□□□ -0.24
RAB40CQ96S21 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RAB40CQ96S21 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms