Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC26.96■■□□□ 1.91
IFT140Q96RY7 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC26.96■■□□□ 1.91
IFT140Q96RY7 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
IFT140Q96RY7 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
IFT140Q96RY7 AKR7A2P1-201ENST00000460134 915 ntBASIC26.96■■□□□ 1.91
IFT140Q96RY7 PFN2-215ENST00000497148 743 ntTSL 4 BASIC26.96■■□□□ 1.91
IFT140Q96RY7 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
IFT140Q96RY7 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC26.96■■□□□ 1.91
IFT140Q96RY7 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC26.96■■□□□ 1.91
IFT140Q96RY7 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC26.96■■□□□ 1.91
IFT140Q96RY7 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC26.96■■□□□ 1.91
IFT140Q96RY7 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
IFT140Q96RY7 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
IFT140Q96RY7 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC26.96■■□□□ 1.91
IFT140Q96RY7 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC26.96■■□□□ 1.91
IFT140Q96RY7 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC26.96■■□□□ 1.91
IFT140Q96RY7 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC26.96■■□□□ 1.91
IFT140Q96RY7 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC26.96■■□□□ 1.91
IFT140Q96RY7 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC26.95■■□□□ 1.91
IFT140Q96RY7 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC26.95■■□□□ 1.91
IFT140Q96RY7 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
IFT140Q96RY7 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC26.95■■□□□ 1.91
IFT140Q96RY7 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC26.95■■□□□ 1.91
IFT140Q96RY7 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC26.95■■□□□ 1.91
IFT140Q96RY7 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
IFT140Q96RY7 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
IFT140Q96RY7 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC26.95■■□□□ 1.91
IFT140Q96RY7 BX284668.4-201ENST00000453917 508 ntBASIC26.95■■□□□ 1.91
IFT140Q96RY7 RPL13AP25-201ENST00000484130 612 ntBASIC26.95■■□□□ 1.91
IFT140Q96RY7 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC26.95■■□□□ 1.91
IFT140Q96RY7 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC26.95■■□□□ 1.91
IFT140Q96RY7 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC26.95■■□□□ 1.91
IFT140Q96RY7 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
IFT140Q96RY7 HCG18-245ENST00000602550 559 ntTSL 4 BASIC26.95■■□□□ 1.91
IFT140Q96RY7 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC26.95■■□□□ 1.91
IFT140Q96RY7 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC26.95■■□□□ 1.91
IFT140Q96RY7 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
IFT140Q96RY7 AC134312.5-201ENST00000568031 1313 ntBASIC26.95■■□□□ 1.9
IFT140Q96RY7 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
IFT140Q96RY7 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
IFT140Q96RY7 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC26.95■■□□□ 1.9
IFT140Q96RY7 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC26.95■■□□□ 1.9
IFT140Q96RY7 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
IFT140Q96RY7 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC26.95■■□□□ 1.9
IFT140Q96RY7 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC26.94■■□□□ 1.9
IFT140Q96RY7 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC26.94■■□□□ 1.9
IFT140Q96RY7 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC26.94■■□□□ 1.9
IFT140Q96RY7 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC26.94■■□□□ 1.9
IFT140Q96RY7 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC26.94■■□□□ 1.9
IFT140Q96RY7 MPRIPP1-201ENST00000452433 1089 ntBASIC26.94■■□□□ 1.9
IFT140Q96RY7 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC26.94■■□□□ 1.9
IFT140Q96RY7 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
IFT140Q96RY7 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC26.94■■□□□ 1.9
IFT140Q96RY7 MIR4706-201ENST00000582134 82 ntBASIC26.94■■□□□ 1.9
IFT140Q96RY7 LARP4-220ENST00000615080 856 ntTSL 5 BASIC26.94■■□□□ 1.9
IFT140Q96RY7 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC26.94■■□□□ 1.9
IFT140Q96RY7 LINC02012-201ENST00000608206 1725 ntBASIC26.94■■□□□ 1.9
IFT140Q96RY7 AL512652.2-201ENST00000625156 1716 ntBASIC26.94■■□□□ 1.9
IFT140Q96RY7 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC26.94■■□□□ 1.9
IFT140Q96RY7 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC26.94■■□□□ 1.9
IFT140Q96RY7 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC26.94■■□□□ 1.9
IFT140Q96RY7 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
IFT140Q96RY7 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
IFT140Q96RY7 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
IFT140Q96RY7 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC26.94■■□□□ 1.9
IFT140Q96RY7 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
IFT140Q96RY7 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC26.93■■□□□ 1.9
IFT140Q96RY7 C1QBPP1-201ENST00000400117 770 ntBASIC26.93■■□□□ 1.9
IFT140Q96RY7 AC253536.4-201ENST00000440539 267 ntBASIC26.93■■□□□ 1.9
IFT140Q96RY7 AC004898.1-201ENST00000451057 766 ntBASIC26.93■■□□□ 1.9
IFT140Q96RY7 UPF3AP2-201ENST00000457924 1132 ntBASIC26.93■■□□□ 1.9
IFT140Q96RY7 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC26.93■■□□□ 1.9
IFT140Q96RY7 CHMP4BP1-201ENST00000556017 588 ntBASIC26.93■■□□□ 1.9
IFT140Q96RY7 PAM16-215ENST00000577031 548 ntTSL 4 BASIC26.93■■□□□ 1.9
IFT140Q96RY7 MIR4321-201ENST00000592276 80 ntBASIC26.93■■□□□ 1.9
IFT140Q96RY7 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC26.93■■□□□ 1.9
IFT140Q96RY7 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC26.93■■□□□ 1.9
IFT140Q96RY7 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC26.93■■□□□ 1.9
IFT140Q96RY7 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
IFT140Q96RY7 AL138688.1-201ENST00000624851 1594 ntBASIC26.93■■□□□ 1.9
IFT140Q96RY7 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC26.93■■□□□ 1.9
IFT140Q96RY7 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
IFT140Q96RY7 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
IFT140Q96RY7 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC26.93■■□□□ 1.9
IFT140Q96RY7 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC26.93■■□□□ 1.9
IFT140Q96RY7 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC26.93■■□□□ 1.9
IFT140Q96RY7 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC26.93■■□□□ 1.9
IFT140Q96RY7 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
IFT140Q96RY7 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC26.93■■□□□ 1.9
IFT140Q96RY7 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC26.93■■□□□ 1.9
IFT140Q96RY7 GPAA1P2-202ENST00000606848 1787 ntBASIC26.93■■□□□ 1.9
IFT140Q96RY7 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
IFT140Q96RY7 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC26.93■■□□□ 1.9
IFT140Q96RY7 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
IFT140Q96RY7 AZGP1P1-201ENST00000411909 902 ntBASIC26.93■■□□□ 1.9
IFT140Q96RY7 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC26.93■■□□□ 1.9
IFT140Q96RY7 AP006547.1-201ENST00000563435 692 ntBASIC26.93■■□□□ 1.9
IFT140Q96RY7 AP001063.1-201ENST00000568332 529 ntBASIC26.93■■□□□ 1.9
IFT140Q96RY7 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
IFT140Q96RY7 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC26.93■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms