Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
NR1H4Q96RI1 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
NR1H4Q96RI1 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NR1H4Q96RI1 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NR1H4Q96RI1 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
NR1H4Q96RI1 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NR1H4Q96RI1 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NR1H4Q96RI1 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NR1H4Q96RI1 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NR1H4Q96RI1 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NR1H4Q96RI1 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
NR1H4Q96RI1 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.72■□□□□ 0.11
NR1H4Q96RI1 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NR1H4Q96RI1 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
NR1H4Q96RI1 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.71■□□□□ 0.11
NR1H4Q96RI1 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC15.71■□□□□ 0.11
NR1H4Q96RI1 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.71■□□□□ 0.11
NR1H4Q96RI1 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NR1H4Q96RI1 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NR1H4Q96RI1 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NR1H4Q96RI1 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.71■□□□□ 0.11
NR1H4Q96RI1 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
NR1H4Q96RI1 CICP23-201ENST00000605013 2741 ntBASIC15.71■□□□□ 0.11
NR1H4Q96RI1 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NR1H4Q96RI1 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
NR1H4Q96RI1 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
NR1H4Q96RI1 AC136621.1-201ENST00000624017 2304 ntBASIC15.71■□□□□ 0.11
NR1H4Q96RI1 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NR1H4Q96RI1 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.71■□□□□ 0.11
NR1H4Q96RI1 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NR1H4Q96RI1 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NR1H4Q96RI1 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NR1H4Q96RI1 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
NR1H4Q96RI1 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NR1H4Q96RI1 CRYGFP-201ENST00000418459 633 ntBASIC15.71■□□□□ 0.11
NR1H4Q96RI1 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC15.71■□□□□ 0.11
NR1H4Q96RI1 AC113404.2-201ENST00000507884 177 ntBASIC15.71■□□□□ 0.11
NR1H4Q96RI1 NUDT16P1-203ENST00000513809 620 ntBASIC15.71■□□□□ 0.11
NR1H4Q96RI1 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC15.71■□□□□ 0.11
NR1H4Q96RI1 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
NR1H4Q96RI1 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC15.71■□□□□ 0.11
NR1H4Q96RI1 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
NR1H4Q96RI1 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
NR1H4Q96RI1 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NR1H4Q96RI1 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NR1H4Q96RI1 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
NR1H4Q96RI1 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC15.71■□□□□ 0.11
NR1H4Q96RI1 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
NR1H4Q96RI1 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NR1H4Q96RI1 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NR1H4Q96RI1 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.71■□□□□ 0.11
NR1H4Q96RI1 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.71■□□□□ 0.11
NR1H4Q96RI1 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
NR1H4Q96RI1 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC15.71■□□□□ 0.1
NR1H4Q96RI1 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
NR1H4Q96RI1 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
NR1H4Q96RI1 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
NR1H4Q96RI1 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
NR1H4Q96RI1 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NR1H4Q96RI1 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
NR1H4Q96RI1 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NR1H4Q96RI1 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NR1H4Q96RI1 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.7■□□□□ 0.1
NR1H4Q96RI1 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NR1H4Q96RI1 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NR1H4Q96RI1 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NR1H4Q96RI1 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NR1H4Q96RI1 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.7■□□□□ 0.1
NR1H4Q96RI1 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
NR1H4Q96RI1 AC020658.6-201ENST00000623564 1870 ntBASIC15.7■□□□□ 0.1
NR1H4Q96RI1 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.7■□□□□ 0.1
NR1H4Q96RI1 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NR1H4Q96RI1 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC15.7■□□□□ 0.1
NR1H4Q96RI1 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NR1H4Q96RI1 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC15.7■□□□□ 0.1
NR1H4Q96RI1 RPS2P55-201ENST00000397318 883 ntBASIC15.7■□□□□ 0.1
NR1H4Q96RI1 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC15.7■□□□□ 0.1
NR1H4Q96RI1 UBE2SP1-201ENST00000450587 669 ntBASIC15.7■□□□□ 0.1
NR1H4Q96RI1 AC107956.1-201ENST00000494359 873 ntBASIC15.7■□□□□ 0.1
NR1H4Q96RI1 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC15.7■□□□□ 0.1
NR1H4Q96RI1 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC15.7■□□□□ 0.1
NR1H4Q96RI1 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC15.7■□□□□ 0.1
NR1H4Q96RI1 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
NR1H4Q96RI1 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
NR1H4Q96RI1 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NR1H4Q96RI1 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NR1H4Q96RI1 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NR1H4Q96RI1 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
NR1H4Q96RI1 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.7■□□□□ 0.1
NR1H4Q96RI1 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
NR1H4Q96RI1 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
NR1H4Q96RI1 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NR1H4Q96RI1 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
NR1H4Q96RI1 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NR1H4Q96RI1 GPR89P-201ENST00000407924 1495 ntBASIC15.7■□□□□ 0.1
NR1H4Q96RI1 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC15.7■□□□□ 0.1
NR1H4Q96RI1 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NR1H4Q96RI1 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NR1H4Q96RI1 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NR1H4Q96RI1 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms