Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
CSMD1Q96PZ7 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CSMD1Q96PZ7 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CSMD1Q96PZ7 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CSMD1Q96PZ7 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC13.98□□□□□ -0.17
CSMD1Q96PZ7 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSMD1Q96PZ7 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC13.98□□□□□ -0.17
CSMD1Q96PZ7 SLC25A47P1-201ENST00000531577 414 ntBASIC13.98□□□□□ -0.17
CSMD1Q96PZ7 AP000812.2-201ENST00000538934 718 ntBASIC13.98□□□□□ -0.17
CSMD1Q96PZ7 AL512361.1-201ENST00000554200 418 ntBASIC13.98□□□□□ -0.17
CSMD1Q96PZ7 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.98□□□□□ -0.17
CSMD1Q96PZ7 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC13.98□□□□□ -0.17
CSMD1Q96PZ7 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CSMD1Q96PZ7 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CSMD1Q96PZ7 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSMD1Q96PZ7 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSMD1Q96PZ7 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSMD1Q96PZ7 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSMD1Q96PZ7 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSMD1Q96PZ7 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC13.98□□□□□ -0.17
CSMD1Q96PZ7 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSMD1Q96PZ7 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC13.98□□□□□ -0.17
CSMD1Q96PZ7 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CSMD1Q96PZ7 REEP1-202ENST00000453231 940 ntTSL 2 BASIC13.98□□□□□ -0.17
CSMD1Q96PZ7 RN7SL618P-201ENST00000477850 296 ntBASIC13.98□□□□□ -0.17
CSMD1Q96PZ7 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC13.98□□□□□ -0.17
CSMD1Q96PZ7 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSMD1Q96PZ7 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC13.98□□□□□ -0.17
CSMD1Q96PZ7 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSMD1Q96PZ7 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSMD1Q96PZ7 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CSMD1Q96PZ7 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CSMD1Q96PZ7 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
CSMD1Q96PZ7 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
CSMD1Q96PZ7 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC13.98□□□□□ -0.17
CSMD1Q96PZ7 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.98□□□□□ -0.17
CSMD1Q96PZ7 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.98□□□□□ -0.17
CSMD1Q96PZ7 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC13.98□□□□□ -0.17
CSMD1Q96PZ7 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
CSMD1Q96PZ7 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSMD1Q96PZ7 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSMD1Q96PZ7 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CSMD1Q96PZ7 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSMD1Q96PZ7 NOC2LP1-202ENST00000452600 2235 ntBASIC13.97□□□□□ -0.17
CSMD1Q96PZ7 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSMD1Q96PZ7 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CSMD1Q96PZ7 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSMD1Q96PZ7 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC13.97□□□□□ -0.17
CSMD1Q96PZ7 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CSMD1Q96PZ7 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSMD1Q96PZ7 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC13.97□□□□□ -0.17
CSMD1Q96PZ7 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSMD1Q96PZ7 NEU3-202ENST00000526068 431 ntTSL 2 BASIC13.97□□□□□ -0.17
CSMD1Q96PZ7 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC13.97□□□□□ -0.17
CSMD1Q96PZ7 U62317.3-201ENST00000608319 855 ntBASIC13.97□□□□□ -0.17
CSMD1Q96PZ7 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CSMD1Q96PZ7 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
CSMD1Q96PZ7 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CSMD1Q96PZ7 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSMD1Q96PZ7 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CSMD1Q96PZ7 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSMD1Q96PZ7 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSMD1Q96PZ7 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
CSMD1Q96PZ7 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CSMD1Q96PZ7 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC13.97□□□□□ -0.17
CSMD1Q96PZ7 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC13.97□□□□□ -0.17
CSMD1Q96PZ7 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CSMD1Q96PZ7 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSMD1Q96PZ7 AC092337.1-201ENST00000568699 1129 ntBASIC13.97□□□□□ -0.17
CSMD1Q96PZ7 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSMD1Q96PZ7 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC13.97□□□□□ -0.17
CSMD1Q96PZ7 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC13.97□□□□□ -0.17
CSMD1Q96PZ7 AC138627.1-207ENST00000641560 1006 ntBASIC13.97□□□□□ -0.17
CSMD1Q96PZ7 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSMD1Q96PZ7 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CSMD1Q96PZ7 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC13.97□□□□□ -0.17
CSMD1Q96PZ7 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CSMD1Q96PZ7 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CSMD1Q96PZ7 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CSMD1Q96PZ7 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSMD1Q96PZ7 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSMD1Q96PZ7 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CSMD1Q96PZ7 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC13.97□□□□□ -0.17
CSMD1Q96PZ7 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSMD1Q96PZ7 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSMD1Q96PZ7 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSMD1Q96PZ7 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC13.97□□□□□ -0.17
CSMD1Q96PZ7 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSMD1Q96PZ7 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CSMD1Q96PZ7 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC13.97□□□□□ -0.17
CSMD1Q96PZ7 FAM220BP-201ENST00000377689 816 ntBASIC13.97□□□□□ -0.17
CSMD1Q96PZ7 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CSMD1Q96PZ7 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CSMD1Q96PZ7 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSMD1Q96PZ7 TMEM198B-204ENST00000484016 896 ntBASIC13.97□□□□□ -0.17
CSMD1Q96PZ7 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSMD1Q96PZ7 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.97□□□□□ -0.17
CSMD1Q96PZ7 AC105021.1-202ENST00000570572 669 ntBASIC13.97□□□□□ -0.17
CSMD1Q96PZ7 AC020765.3-201ENST00000613051 740 ntBASIC13.97□□□□□ -0.17
CSMD1Q96PZ7 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms