Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 HCG4-201ENST00000418983 998 ntBASIC13.54□□□□□ -0.24
ZNF48Q96MX3 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC13.54□□□□□ -0.24
ZNF48Q96MX3 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC13.54□□□□□ -0.24
ZNF48Q96MX3 COX20P2-201ENST00000452636 358 ntBASIC13.54□□□□□ -0.24
ZNF48Q96MX3 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF48Q96MX3 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF48Q96MX3 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF48Q96MX3 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC13.54□□□□□ -0.24
ZNF48Q96MX3 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC13.54□□□□□ -0.24
ZNF48Q96MX3 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC13.54□□□□□ -0.24
ZNF48Q96MX3 AQP6-203ENST00000551733 849 ntTSL 3 BASIC13.54□□□□□ -0.24
ZNF48Q96MX3 AC026150.2-201ENST00000564693 1156 ntBASIC13.54□□□□□ -0.24
ZNF48Q96MX3 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC13.54□□□□□ -0.24
ZNF48Q96MX3 U1.21-201ENST00000580816 167 ntBASIC13.54□□□□□ -0.24
ZNF48Q96MX3 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF48Q96MX3 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF48Q96MX3 AL031055.1-201ENST00000606362 631 ntBASIC13.54□□□□□ -0.24
ZNF48Q96MX3 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
ZNF48Q96MX3 WT1-AS_2.1-201ENST00000613208 137 ntBASIC13.54□□□□□ -0.24
ZNF48Q96MX3 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC13.54□□□□□ -0.24
ZNF48Q96MX3 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF48Q96MX3 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC13.54□□□□□ -0.24
ZNF48Q96MX3 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF48Q96MX3 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC13.54□□□□□ -0.24
ZNF48Q96MX3 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC13.54□□□□□ -0.24
ZNF48Q96MX3 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF48Q96MX3 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF48Q96MX3 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF48Q96MX3 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF48Q96MX3 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF48Q96MX3 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF48Q96MX3 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
ZNF48Q96MX3 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF48Q96MX3 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF48Q96MX3 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC13.54□□□□□ -0.24
ZNF48Q96MX3 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF48Q96MX3 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF48Q96MX3 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF48Q96MX3 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
ZNF48Q96MX3 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
ZNF48Q96MX3 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
ZNF48Q96MX3 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC13.54□□□□□ -0.24
ZNF48Q96MX3 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC13.53□□□□□ -0.24
ZNF48Q96MX3 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
ZNF48Q96MX3 AC124067.4-201ENST00000519691 2379 ntBASIC13.53□□□□□ -0.24
ZNF48Q96MX3 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF48Q96MX3 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF48Q96MX3 HARS-204ENST00000438307 1789 ntTSL 2 BASIC13.53□□□□□ -0.24
ZNF48Q96MX3 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC13.53□□□□□ -0.24
ZNF48Q96MX3 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF48Q96MX3 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF48Q96MX3 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF48Q96MX3 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF48Q96MX3 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF48Q96MX3 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF48Q96MX3 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF48Q96MX3 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF48Q96MX3 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF48Q96MX3 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF48Q96MX3 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC13.53□□□□□ -0.24
ZNF48Q96MX3 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC13.53□□□□□ -0.24
ZNF48Q96MX3 MIR943-201ENST00000401286 94 ntBASIC13.53□□□□□ -0.24
ZNF48Q96MX3 AC055876.3-201ENST00000431496 288 ntBASIC13.53□□□□□ -0.24
ZNF48Q96MX3 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC13.53□□□□□ -0.24
ZNF48Q96MX3 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC13.53□□□□□ -0.24
ZNF48Q96MX3 SPDYE14P-201ENST00000442619 822 ntBASIC13.53□□□□□ -0.24
ZNF48Q96MX3 MTRF1LP2-201ENST00000506027 1122 ntBASIC13.53□□□□□ -0.24
ZNF48Q96MX3 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC13.53□□□□□ -0.24
ZNF48Q96MX3 KRT8P23-201ENST00000560090 1207 ntBASIC13.53□□□□□ -0.24
ZNF48Q96MX3 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC13.53□□□□□ -0.24
ZNF48Q96MX3 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
ZNF48Q96MX3 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC13.53□□□□□ -0.24
ZNF48Q96MX3 AC138649.4-201ENST00000612222 287 ntBASIC13.53□□□□□ -0.24
ZNF48Q96MX3 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF48Q96MX3 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
ZNF48Q96MX3 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF48Q96MX3 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF48Q96MX3 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC13.53□□□□□ -0.24
ZNF48Q96MX3 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF48Q96MX3 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF48Q96MX3 TOP3BP1-201ENST00000420768 1380 ntBASIC13.53□□□□□ -0.24
ZNF48Q96MX3 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF48Q96MX3 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF48Q96MX3 WASH6P-202ENST00000359512 1437 ntBASIC13.53□□□□□ -0.24
ZNF48Q96MX3 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF48Q96MX3 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF48Q96MX3 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
ZNF48Q96MX3 AC008677.1-201ENST00000519230 1561 ntBASIC13.53□□□□□ -0.24
ZNF48Q96MX3 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF48Q96MX3 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC13.53□□□□□ -0.24
ZNF48Q96MX3 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF48Q96MX3 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF48Q96MX3 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF48Q96MX3 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
ZNF48Q96MX3 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF48Q96MX3 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
ZNF48Q96MX3 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ZNF48Q96MX3 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ZNF48Q96MX3 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
ZNF48Q96MX3 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms