Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.59■□□□□ 0.25
ECHDC3Q96DC8 AC005237.2-201ENST00000434368 219 ntBASIC16.59■□□□□ 0.25
ECHDC3Q96DC8 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
ECHDC3Q96DC8 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ECHDC3Q96DC8 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.59■□□□□ 0.25
ECHDC3Q96DC8 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.59■□□□□ 0.25
ECHDC3Q96DC8 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.59■□□□□ 0.25
ECHDC3Q96DC8 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.59■□□□□ 0.25
ECHDC3Q96DC8 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ECHDC3Q96DC8 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.59■□□□□ 0.25
ECHDC3Q96DC8 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ECHDC3Q96DC8 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
ECHDC3Q96DC8 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
ECHDC3Q96DC8 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ECHDC3Q96DC8 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
ECHDC3Q96DC8 FOXO1B-201ENST00000504678 1527 ntBASIC16.59■□□□□ 0.25
ECHDC3Q96DC8 NKILA-202ENST00000614771 2598 ntBASIC16.59■□□□□ 0.25
ECHDC3Q96DC8 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ECHDC3Q96DC8 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ECHDC3Q96DC8 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ECHDC3Q96DC8 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.58■□□□□ 0.25
ECHDC3Q96DC8 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ECHDC3Q96DC8 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.58■□□□□ 0.25
ECHDC3Q96DC8 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ECHDC3Q96DC8 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ECHDC3Q96DC8 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.58■□□□□ 0.25
ECHDC3Q96DC8 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
ECHDC3Q96DC8 AL139400.1-201ENST00000366220 510 ntBASIC16.58■□□□□ 0.24
ECHDC3Q96DC8 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.58■□□□□ 0.24
ECHDC3Q96DC8 AC093724.1-201ENST00000448659 1027 ntBASIC16.58■□□□□ 0.24
ECHDC3Q96DC8 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.58■□□□□ 0.24
ECHDC3Q96DC8 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.58■□□□□ 0.24
ECHDC3Q96DC8 HLA-J-203ENST00000494367 1087 ntBASIC16.58■□□□□ 0.24
ECHDC3Q96DC8 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.58■□□□□ 0.24
ECHDC3Q96DC8 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ECHDC3Q96DC8 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.58■□□□□ 0.24
ECHDC3Q96DC8 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.58■□□□□ 0.24
ECHDC3Q96DC8 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
ECHDC3Q96DC8 LINC01144-201ENST00000626198 1710 ntBASIC16.58■□□□□ 0.24
ECHDC3Q96DC8 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
ECHDC3Q96DC8 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ECHDC3Q96DC8 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ECHDC3Q96DC8 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ECHDC3Q96DC8 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ECHDC3Q96DC8 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.58■□□□□ 0.24
ECHDC3Q96DC8 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ECHDC3Q96DC8 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ECHDC3Q96DC8 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.58■□□□□ 0.24
ECHDC3Q96DC8 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ECHDC3Q96DC8 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.58■□□□□ 0.24
ECHDC3Q96DC8 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
ECHDC3Q96DC8 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
ECHDC3Q96DC8 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
ECHDC3Q96DC8 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
ECHDC3Q96DC8 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ECHDC3Q96DC8 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.57■□□□□ 0.24
ECHDC3Q96DC8 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.57■□□□□ 0.24
ECHDC3Q96DC8 AC092171.3-201ENST00000610122 2651 ntBASIC16.57■□□□□ 0.24
ECHDC3Q96DC8 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.57■□□□□ 0.24
ECHDC3Q96DC8 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
ECHDC3Q96DC8 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ECHDC3Q96DC8 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ECHDC3Q96DC8 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.57■□□□□ 0.24
ECHDC3Q96DC8 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ECHDC3Q96DC8 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.57■□□□□ 0.24
ECHDC3Q96DC8 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.57■□□□□ 0.24
ECHDC3Q96DC8 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ECHDC3Q96DC8 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.57■□□□□ 0.24
ECHDC3Q96DC8 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.57■□□□□ 0.24
ECHDC3Q96DC8 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.57■□□□□ 0.24
ECHDC3Q96DC8 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.57■□□□□ 0.24
ECHDC3Q96DC8 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ECHDC3Q96DC8 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
ECHDC3Q96DC8 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ECHDC3Q96DC8 TSEN15P1-201ENST00000423257 515 ntBASIC16.57■□□□□ 0.24
ECHDC3Q96DC8 KRT18P32-201ENST00000424695 1287 ntBASIC16.57■□□□□ 0.24
ECHDC3Q96DC8 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.57■□□□□ 0.24
ECHDC3Q96DC8 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ECHDC3Q96DC8 SLC25A39P2-201ENST00000537614 270 ntBASIC16.57■□□□□ 0.24
ECHDC3Q96DC8 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.57■□□□□ 0.24
ECHDC3Q96DC8 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.57■□□□□ 0.24
ECHDC3Q96DC8 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.57■□□□□ 0.24
ECHDC3Q96DC8 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
ECHDC3Q96DC8 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ECHDC3Q96DC8 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.57■□□□□ 0.24
ECHDC3Q96DC8 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
ECHDC3Q96DC8 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ECHDC3Q96DC8 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ECHDC3Q96DC8 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ECHDC3Q96DC8 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
ECHDC3Q96DC8 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ECHDC3Q96DC8 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ECHDC3Q96DC8 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ECHDC3Q96DC8 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
ECHDC3Q96DC8 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
ECHDC3Q96DC8 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.56■□□□□ 0.24
ECHDC3Q96DC8 UXT-AS1-201ENST00000590504 1525 ntBASIC16.56■□□□□ 0.24
ECHDC3Q96DC8 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
ECHDC3Q96DC8 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.56■□□□□ 0.24
ECHDC3Q96DC8 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms