Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TRIM43Q96BQ3 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM43Q96BQ3 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM43Q96BQ3 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM43Q96BQ3 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM43Q96BQ3 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM43Q96BQ3 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
TRIM43Q96BQ3 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM43Q96BQ3 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
TRIM43Q96BQ3 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC17.83■□□□□ 0.44
TRIM43Q96BQ3 AC025048.3-201ENST00000590609 569 ntBASIC17.83■□□□□ 0.44
TRIM43Q96BQ3 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC17.83■□□□□ 0.44
TRIM43Q96BQ3 AC005702.4-201ENST00000618393 416 ntBASIC17.83■□□□□ 0.44
TRIM43Q96BQ3 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC17.83■□□□□ 0.44
TRIM43Q96BQ3 ABBA01031660.1-201ENST00000635219 756 ntBASIC17.83■□□□□ 0.44
TRIM43Q96BQ3 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM43Q96BQ3 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM43Q96BQ3 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM43Q96BQ3 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
TRIM43Q96BQ3 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM43Q96BQ3 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM43Q96BQ3 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.83■□□□□ 0.44
TRIM43Q96BQ3 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.82■□□□□ 0.44
TRIM43Q96BQ3 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.82■□□□□ 0.44
TRIM43Q96BQ3 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM43Q96BQ3 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC17.82■□□□□ 0.44
TRIM43Q96BQ3 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM43Q96BQ3 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM43Q96BQ3 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM43Q96BQ3 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM43Q96BQ3 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM43Q96BQ3 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
TRIM43Q96BQ3 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM43Q96BQ3 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM43Q96BQ3 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM43Q96BQ3 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM43Q96BQ3 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM43Q96BQ3 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC17.82■□□□□ 0.44
TRIM43Q96BQ3 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC17.82■□□□□ 0.44
TRIM43Q96BQ3 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TRIM43Q96BQ3 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM43Q96BQ3 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM43Q96BQ3 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC17.82■□□□□ 0.44
TRIM43Q96BQ3 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
TRIM43Q96BQ3 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.82■□□□□ 0.44
TRIM43Q96BQ3 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM43Q96BQ3 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM43Q96BQ3 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
TRIM43Q96BQ3 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM43Q96BQ3 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
TRIM43Q96BQ3 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
TRIM43Q96BQ3 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.81■□□□□ 0.44
TRIM43Q96BQ3 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.81■□□□□ 0.44
TRIM43Q96BQ3 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM43Q96BQ3 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
TRIM43Q96BQ3 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM43Q96BQ3 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM43Q96BQ3 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM43Q96BQ3 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC17.81■□□□□ 0.44
TRIM43Q96BQ3 APOC3-202ENST00000375345 604 ntTSL 5 BASIC17.81■□□□□ 0.44
TRIM43Q96BQ3 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
TRIM43Q96BQ3 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC17.81■□□□□ 0.44
TRIM43Q96BQ3 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC17.81■□□□□ 0.44
TRIM43Q96BQ3 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC17.81■□□□□ 0.44
TRIM43Q96BQ3 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC17.81■□□□□ 0.44
TRIM43Q96BQ3 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC17.81■□□□□ 0.44
TRIM43Q96BQ3 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC17.81■□□□□ 0.44
TRIM43Q96BQ3 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.81■□□□□ 0.44
TRIM43Q96BQ3 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM43Q96BQ3 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.81■□□□□ 0.44
TRIM43Q96BQ3 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM43Q96BQ3 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM43Q96BQ3 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM43Q96BQ3 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
TRIM43Q96BQ3 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.81■□□□□ 0.44
TRIM43Q96BQ3 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM43Q96BQ3 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM43Q96BQ3 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM43Q96BQ3 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM43Q96BQ3 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.81■□□□□ 0.44
TRIM43Q96BQ3 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM43Q96BQ3 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.81■□□□□ 0.44
TRIM43Q96BQ3 DEK-201ENST00000244776 1441 ntTSL 2 BASIC17.81■□□□□ 0.44
TRIM43Q96BQ3 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM43Q96BQ3 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
TRIM43Q96BQ3 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM43Q96BQ3 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM43Q96BQ3 TUBB8P12-201ENST00000308911 1335 ntBASIC17.8■□□□□ 0.44
TRIM43Q96BQ3 TUBB7P-202ENST00000428444 1305 ntBASIC17.8■□□□□ 0.44
TRIM43Q96BQ3 TUBB8P7-204ENST00000567960 1332 ntBASIC17.8■□□□□ 0.44
TRIM43Q96BQ3 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM43Q96BQ3 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.8■□□□□ 0.44
TRIM43Q96BQ3 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM43Q96BQ3 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM43Q96BQ3 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM43Q96BQ3 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
TRIM43Q96BQ3 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM43Q96BQ3 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM43Q96BQ3 USB1-202ENST00000423271 1217 ntTSL 2 BASIC17.8■□□□□ 0.44
TRIM43Q96BQ3 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms