Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CKAP2Q8WWK9 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CKAP2Q8WWK9 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CKAP2Q8WWK9 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CKAP2Q8WWK9 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.57■□□□□ 0.24
CKAP2Q8WWK9 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
CKAP2Q8WWK9 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CKAP2Q8WWK9 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CKAP2Q8WWK9 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CKAP2Q8WWK9 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.56■□□□□ 0.24
CKAP2Q8WWK9 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CKAP2Q8WWK9 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CKAP2Q8WWK9 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CKAP2Q8WWK9 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CKAP2Q8WWK9 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CKAP2Q8WWK9 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CKAP2Q8WWK9 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CKAP2Q8WWK9 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CKAP2Q8WWK9 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CKAP2Q8WWK9 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CKAP2Q8WWK9 KRT8P39-201ENST00000396270 1433 ntBASIC16.56■□□□□ 0.24
CKAP2Q8WWK9 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CKAP2Q8WWK9 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CKAP2Q8WWK9 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
CKAP2Q8WWK9 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.56■□□□□ 0.24
CKAP2Q8WWK9 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.56■□□□□ 0.24
CKAP2Q8WWK9 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CKAP2Q8WWK9 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CKAP2Q8WWK9 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
CKAP2Q8WWK9 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CKAP2Q8WWK9 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CKAP2Q8WWK9 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CKAP2Q8WWK9 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.56■□□□□ 0.24
CKAP2Q8WWK9 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.56■□□□□ 0.24
CKAP2Q8WWK9 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CKAP2Q8WWK9 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.56■□□□□ 0.24
CKAP2Q8WWK9 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CKAP2Q8WWK9 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.56■□□□□ 0.24
CKAP2Q8WWK9 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CKAP2Q8WWK9 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.56■□□□□ 0.24
CKAP2Q8WWK9 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CKAP2Q8WWK9 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CKAP2Q8WWK9 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CKAP2Q8WWK9 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CKAP2Q8WWK9 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.56■□□□□ 0.24
CKAP2Q8WWK9 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CKAP2Q8WWK9 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CKAP2Q8WWK9 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CKAP2Q8WWK9 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CKAP2Q8WWK9 AC148477.5-201ENST00000625164 1645 ntBASIC16.56■□□□□ 0.24
CKAP2Q8WWK9 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.55■□□□□ 0.24
CKAP2Q8WWK9 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
CKAP2Q8WWK9 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CKAP2Q8WWK9 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.55■□□□□ 0.24
CKAP2Q8WWK9 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CKAP2Q8WWK9 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CKAP2Q8WWK9 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.55■□□□□ 0.24
CKAP2Q8WWK9 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CKAP2Q8WWK9 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CKAP2Q8WWK9 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CKAP2Q8WWK9 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CKAP2Q8WWK9 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CKAP2Q8WWK9 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CKAP2Q8WWK9 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CKAP2Q8WWK9 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CKAP2Q8WWK9 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CKAP2Q8WWK9 SIGLEC30P-201ENST00000455569 941 ntBASIC16.55■□□□□ 0.24
CKAP2Q8WWK9 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CKAP2Q8WWK9 AC009533.2-201ENST00000543664 586 ntBASIC16.55■□□□□ 0.24
CKAP2Q8WWK9 TERC-201ENST00000602385 541 ntBASIC16.55■□□□□ 0.24
CKAP2Q8WWK9 AL592071.1-201ENST00000611956 408 ntBASIC16.55■□□□□ 0.24
CKAP2Q8WWK9 AC124864.1-201ENST00000623408 392 ntBASIC16.55■□□□□ 0.24
CKAP2Q8WWK9 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CKAP2Q8WWK9 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
CKAP2Q8WWK9 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CKAP2Q8WWK9 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.55■□□□□ 0.24
CKAP2Q8WWK9 LINC01144-201ENST00000626198 1710 ntBASIC16.55■□□□□ 0.24
CKAP2Q8WWK9 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CKAP2Q8WWK9 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.55■□□□□ 0.24
CKAP2Q8WWK9 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CKAP2Q8WWK9 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CKAP2Q8WWK9 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CKAP2Q8WWK9 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CKAP2Q8WWK9 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.55■□□□□ 0.24
CKAP2Q8WWK9 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.55■□□□□ 0.24
CKAP2Q8WWK9 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CKAP2Q8WWK9 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CKAP2Q8WWK9 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CKAP2Q8WWK9 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.55■□□□□ 0.24
CKAP2Q8WWK9 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CKAP2Q8WWK9 PCGF3-213ENST00000620529 1899 ntBASIC16.54■□□□□ 0.24
CKAP2Q8WWK9 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CKAP2Q8WWK9 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CKAP2Q8WWK9 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CKAP2Q8WWK9 AC243591.1-201ENST00000452967 1364 ntBASIC16.54■□□□□ 0.24
CKAP2Q8WWK9 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CKAP2Q8WWK9 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CKAP2Q8WWK9 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.54■□□□□ 0.24
CKAP2Q8WWK9 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CKAP2Q8WWK9 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms