Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
SMIM11BQ8TCY0 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
SMIM11BQ8TCY0 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
SMIM11BQ8TCY0 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC10.85□□□□□ -0.67
SMIM11BQ8TCY0 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC10.85□□□□□ -0.67
SMIM11BQ8TCY0 UBE2SP1-201ENST00000450587 669 ntBASIC10.85□□□□□ -0.67
SMIM11BQ8TCY0 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC10.85□□□□□ -0.67
SMIM11BQ8TCY0 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SMIM11BQ8TCY0 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC10.85□□□□□ -0.67
SMIM11BQ8TCY0 KLF13-207ENST00000560473 489 ntTSL 3 BASIC10.85□□□□□ -0.67
SMIM11BQ8TCY0 TEN1-204ENST00000588202 862 ntTSL 3 BASIC10.85□□□□□ -0.67
SMIM11BQ8TCY0 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
SMIM11BQ8TCY0 AC112504.1-201ENST00000623415 1841 ntBASIC10.85□□□□□ -0.67
SMIM11BQ8TCY0 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC10.85□□□□□ -0.67
SMIM11BQ8TCY0 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
SMIM11BQ8TCY0 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC10.85□□□□□ -0.67
SMIM11BQ8TCY0 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SMIM11BQ8TCY0 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC10.85□□□□□ -0.67
SMIM11BQ8TCY0 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
SMIM11BQ8TCY0 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SMIM11BQ8TCY0 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SMIM11BQ8TCY0 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SMIM11BQ8TCY0 LINC02447-202ENST00000501888 2146 ntBASIC10.85□□□□□ -0.67
SMIM11BQ8TCY0 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SMIM11BQ8TCY0 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SMIM11BQ8TCY0 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
SMIM11BQ8TCY0 GGT3P-204ENST00000453783 1664 ntBASIC10.85□□□□□ -0.67
SMIM11BQ8TCY0 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC10.85□□□□□ -0.67
SMIM11BQ8TCY0 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
SMIM11BQ8TCY0 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC10.85□□□□□ -0.67
SMIM11BQ8TCY0 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
SMIM11BQ8TCY0 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SMIM11BQ8TCY0 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SMIM11BQ8TCY0 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SMIM11BQ8TCY0 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC10.85□□□□□ -0.67
SMIM11BQ8TCY0 TPO-203ENST00000346956 2923 ntTSL 5 BASIC10.85□□□□□ -0.67
SMIM11BQ8TCY0 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SMIM11BQ8TCY0 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
SMIM11BQ8TCY0 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SMIM11BQ8TCY0 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC10.84□□□□□ -0.67
SMIM11BQ8TCY0 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC10.84□□□□□ -0.67
SMIM11BQ8TCY0 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC10.84□□□□□ -0.67
SMIM11BQ8TCY0 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SMIM11BQ8TCY0 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SMIM11BQ8TCY0 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SMIM11BQ8TCY0 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
SMIM11BQ8TCY0 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC10.84□□□□□ -0.67
SMIM11BQ8TCY0 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
SMIM11BQ8TCY0 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SMIM11BQ8TCY0 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
SMIM11BQ8TCY0 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SMIM11BQ8TCY0 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SMIM11BQ8TCY0 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SMIM11BQ8TCY0 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC10.84□□□□□ -0.67
SMIM11BQ8TCY0 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SMIM11BQ8TCY0 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SMIM11BQ8TCY0 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
SMIM11BQ8TCY0 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SMIM11BQ8TCY0 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
SMIM11BQ8TCY0 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SMIM11BQ8TCY0 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SMIM11BQ8TCY0 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
SMIM11BQ8TCY0 PRR31-201ENST00000371629 978 ntTSL 2 BASIC10.84□□□□□ -0.67
SMIM11BQ8TCY0 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SMIM11BQ8TCY0 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
SMIM11BQ8TCY0 PARL-206ENST00000435888 1098 ntTSL 5 BASIC10.84□□□□□ -0.67
SMIM11BQ8TCY0 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
SMIM11BQ8TCY0 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC10.84□□□□□ -0.67
SMIM11BQ8TCY0 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
SMIM11BQ8TCY0 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC10.84□□□□□ -0.67
SMIM11BQ8TCY0 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
SMIM11BQ8TCY0 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC10.84□□□□□ -0.67
SMIM11BQ8TCY0 NT5C-210ENST00000582160 860 ntTSL 2 BASIC10.84□□□□□ -0.67
SMIM11BQ8TCY0 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC10.84□□□□□ -0.67
SMIM11BQ8TCY0 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SMIM11BQ8TCY0 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
SMIM11BQ8TCY0 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SMIM11BQ8TCY0 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC10.84□□□□□ -0.67
SMIM11BQ8TCY0 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SMIM11BQ8TCY0 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC10.84□□□□□ -0.67
SMIM11BQ8TCY0 AC010653.2-201ENST00000623505 997 ntBASIC10.84□□□□□ -0.67
SMIM11BQ8TCY0 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SMIM11BQ8TCY0 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
SMIM11BQ8TCY0 AL021920.2-201ENST00000624828 1351 ntBASIC10.84□□□□□ -0.67
SMIM11BQ8TCY0 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC10.84□□□□□ -0.67
SMIM11BQ8TCY0 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC10.84□□□□□ -0.67
SMIM11BQ8TCY0 HARS-203ENST00000431330 1774 ntTSL 2 BASIC10.84□□□□□ -0.67
SMIM11BQ8TCY0 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SMIM11BQ8TCY0 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC10.84□□□□□ -0.67
SMIM11BQ8TCY0 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
SMIM11BQ8TCY0 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SMIM11BQ8TCY0 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC10.84□□□□□ -0.67
SMIM11BQ8TCY0 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SMIM11BQ8TCY0 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SMIM11BQ8TCY0 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
SMIM11BQ8TCY0 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
SMIM11BQ8TCY0 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SMIM11BQ8TCY0 TCAF2P1-201ENST00000291129 2421 ntBASIC10.84□□□□□ -0.67
SMIM11BQ8TCY0 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SMIM11BQ8TCY0 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms