Protein–RNA interactions for Protein: Q8NHU3

SGMS2, Phosphatidylcholine:ceramide cholinephosphotransferase 2, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS2Q8NHU3 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SGMS2Q8NHU3 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC13.83□□□□□ -0.2
SGMS2Q8NHU3 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
SGMS2Q8NHU3 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SGMS2Q8NHU3 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SGMS2Q8NHU3 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SGMS2Q8NHU3 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SGMS2Q8NHU3 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC13.83□□□□□ -0.2
SGMS2Q8NHU3 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC13.83□□□□□ -0.2
SGMS2Q8NHU3 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC13.83□□□□□ -0.2
SGMS2Q8NHU3 ACTG1P14-201ENST00000446382 1122 ntBASIC13.83□□□□□ -0.2
SGMS2Q8NHU3 KRT18P2-201ENST00000447938 1258 ntBASIC13.83□□□□□ -0.2
SGMS2Q8NHU3 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC13.83□□□□□ -0.2
SGMS2Q8NHU3 RNA5SP421-201ENST00000516864 134 ntBASIC13.83□□□□□ -0.2
SGMS2Q8NHU3 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SGMS2Q8NHU3 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC13.83□□□□□ -0.2
SGMS2Q8NHU3 AC025678.2-201ENST00000562061 970 ntBASIC13.83□□□□□ -0.2
SGMS2Q8NHU3 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SGMS2Q8NHU3 LSM12-202ENST00000585388 942 ntTSL 3 BASIC13.83□□□□□ -0.2
SGMS2Q8NHU3 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC13.83□□□□□ -0.2
SGMS2Q8NHU3 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC13.83□□□□□ -0.2
SGMS2Q8NHU3 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC13.83□□□□□ -0.2
SGMS2Q8NHU3 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SGMS2Q8NHU3 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC13.83□□□□□ -0.2
SGMS2Q8NHU3 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SGMS2Q8NHU3 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC13.83□□□□□ -0.2
SGMS2Q8NHU3 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC13.83□□□□□ -0.2
SGMS2Q8NHU3 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SGMS2Q8NHU3 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SGMS2Q8NHU3 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SGMS2Q8NHU3 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SGMS2Q8NHU3 CES3-203ENST00000543856 3178 ntTSL 2 BASIC13.83□□□□□ -0.2
SGMS2Q8NHU3 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC13.83□□□□□ -0.2
SGMS2Q8NHU3 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SGMS2Q8NHU3 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SGMS2Q8NHU3 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
SGMS2Q8NHU3 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC13.83□□□□□ -0.2
SGMS2Q8NHU3 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SGMS2Q8NHU3 LINC00554-201ENST00000564841 3011 ntBASIC13.82□□□□□ -0.2
SGMS2Q8NHU3 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SGMS2Q8NHU3 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SGMS2Q8NHU3 LYSMD4-203ENST00000378904 2122 ntBASIC13.82□□□□□ -0.2
SGMS2Q8NHU3 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SGMS2Q8NHU3 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC13.82□□□□□ -0.2
SGMS2Q8NHU3 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC13.82□□□□□ -0.2
SGMS2Q8NHU3 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SGMS2Q8NHU3 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC13.82□□□□□ -0.2
SGMS2Q8NHU3 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SGMS2Q8NHU3 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC13.82□□□□□ -0.2
SGMS2Q8NHU3 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SGMS2Q8NHU3 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC13.82□□□□□ -0.2
SGMS2Q8NHU3 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SGMS2Q8NHU3 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SGMS2Q8NHU3 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC13.82□□□□□ -0.2
SGMS2Q8NHU3 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SGMS2Q8NHU3 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC13.82□□□□□ -0.2
SGMS2Q8NHU3 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC13.82□□□□□ -0.2
SGMS2Q8NHU3 FUT8-AS1-201ENST00000621019 1521 ntBASIC13.82□□□□□ -0.2
SGMS2Q8NHU3 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
SGMS2Q8NHU3 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SGMS2Q8NHU3 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC13.82□□□□□ -0.2
SGMS2Q8NHU3 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC13.82□□□□□ -0.2
SGMS2Q8NHU3 DDT-204ENST00000404092 805 ntTSL 3 BASIC13.82□□□□□ -0.2
SGMS2Q8NHU3 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SGMS2Q8NHU3 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SGMS2Q8NHU3 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC13.82□□□□□ -0.2
SGMS2Q8NHU3 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC13.82□□□□□ -0.2
SGMS2Q8NHU3 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC13.82□□□□□ -0.2
SGMS2Q8NHU3 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
SGMS2Q8NHU3 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
SGMS2Q8NHU3 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
SGMS2Q8NHU3 AC093512.1-201ENST00000617969 520 ntBASIC13.82□□□□□ -0.2
SGMS2Q8NHU3 AF228730.6-201ENST00000641497 218 ntBASIC13.82□□□□□ -0.2
SGMS2Q8NHU3 AC084121.3-201ENST00000641716 218 ntBASIC13.82□□□□□ -0.2
SGMS2Q8NHU3 AC105233.6-201ENST00000642093 218 ntBASIC13.82□□□□□ -0.2
SGMS2Q8NHU3 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SGMS2Q8NHU3 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SGMS2Q8NHU3 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SGMS2Q8NHU3 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SGMS2Q8NHU3 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SGMS2Q8NHU3 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SGMS2Q8NHU3 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SGMS2Q8NHU3 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SGMS2Q8NHU3 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC13.82□□□□□ -0.2
SGMS2Q8NHU3 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
SGMS2Q8NHU3 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC13.82□□□□□ -0.2
SGMS2Q8NHU3 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SGMS2Q8NHU3 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SGMS2Q8NHU3 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SGMS2Q8NHU3 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC13.81□□□□□ -0.2
SGMS2Q8NHU3 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SGMS2Q8NHU3 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SGMS2Q8NHU3 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SGMS2Q8NHU3 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC13.81□□□□□ -0.2
SGMS2Q8NHU3 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
SGMS2Q8NHU3 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC13.81□□□□□ -0.2
SGMS2Q8NHU3 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SGMS2Q8NHU3 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SGMS2Q8NHU3 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SGMS2Q8NHU3 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms