Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HIPK4Q8NE63 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HIPK4Q8NE63 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HIPK4Q8NE63 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HIPK4Q8NE63 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HIPK4Q8NE63 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HIPK4Q8NE63 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HIPK4Q8NE63 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HIPK4Q8NE63 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.24■□□□□ 0.19
HIPK4Q8NE63 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.24■□□□□ 0.19
HIPK4Q8NE63 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.24■□□□□ 0.19
HIPK4Q8NE63 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
HIPK4Q8NE63 AC122714.2-201ENST00000502787 707 ntBASIC16.24■□□□□ 0.19
HIPK4Q8NE63 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.24■□□□□ 0.19
HIPK4Q8NE63 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HIPK4Q8NE63 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.24■□□□□ 0.19
HIPK4Q8NE63 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.24■□□□□ 0.19
HIPK4Q8NE63 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
HIPK4Q8NE63 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
HIPK4Q8NE63 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
HIPK4Q8NE63 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
HIPK4Q8NE63 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.24■□□□□ 0.19
HIPK4Q8NE63 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
HIPK4Q8NE63 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.24■□□□□ 0.19
HIPK4Q8NE63 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HIPK4Q8NE63 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HIPK4Q8NE63 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
HIPK4Q8NE63 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
HIPK4Q8NE63 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.24■□□□□ 0.19
HIPK4Q8NE63 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
HIPK4Q8NE63 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HIPK4Q8NE63 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HIPK4Q8NE63 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HIPK4Q8NE63 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HIPK4Q8NE63 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.23■□□□□ 0.19
HIPK4Q8NE63 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.23■□□□□ 0.19
HIPK4Q8NE63 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
HIPK4Q8NE63 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HIPK4Q8NE63 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HIPK4Q8NE63 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.23■□□□□ 0.19
HIPK4Q8NE63 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HIPK4Q8NE63 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HIPK4Q8NE63 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.23■□□□□ 0.19
HIPK4Q8NE63 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HIPK4Q8NE63 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
HIPK4Q8NE63 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HIPK4Q8NE63 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
HIPK4Q8NE63 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.23■□□□□ 0.19
HIPK4Q8NE63 AC006538.1-201ENST00000567905 1585 ntBASIC16.23■□□□□ 0.19
HIPK4Q8NE63 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
HIPK4Q8NE63 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HIPK4Q8NE63 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HIPK4Q8NE63 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
HIPK4Q8NE63 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
HIPK4Q8NE63 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HIPK4Q8NE63 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
HIPK4Q8NE63 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.23■□□□□ 0.19
HIPK4Q8NE63 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.23■□□□□ 0.19
HIPK4Q8NE63 SPDYE13P-201ENST00000445314 798 ntBASIC16.23■□□□□ 0.19
HIPK4Q8NE63 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HIPK4Q8NE63 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.23■□□□□ 0.19
HIPK4Q8NE63 AC111152.3-201ENST00000569699 673 ntBASIC16.23■□□□□ 0.19
HIPK4Q8NE63 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.23■□□□□ 0.19
HIPK4Q8NE63 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.23■□□□□ 0.19
HIPK4Q8NE63 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HIPK4Q8NE63 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC16.23■□□□□ 0.19
HIPK4Q8NE63 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
HIPK4Q8NE63 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.23■□□□□ 0.19
HIPK4Q8NE63 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HIPK4Q8NE63 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HIPK4Q8NE63 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HIPK4Q8NE63 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
HIPK4Q8NE63 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HIPK4Q8NE63 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HIPK4Q8NE63 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
HIPK4Q8NE63 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HIPK4Q8NE63 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HIPK4Q8NE63 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HIPK4Q8NE63 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HIPK4Q8NE63 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HIPK4Q8NE63 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HIPK4Q8NE63 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
HIPK4Q8NE63 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HIPK4Q8NE63 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HIPK4Q8NE63 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HIPK4Q8NE63 AC125634.1-201ENST00000438758 1403 ntBASIC16.22■□□□□ 0.19
HIPK4Q8NE63 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HIPK4Q8NE63 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.22■□□□□ 0.19
HIPK4Q8NE63 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HIPK4Q8NE63 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
HIPK4Q8NE63 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.22■□□□□ 0.19
HIPK4Q8NE63 AC103564.2-201ENST00000432853 1299 ntBASIC16.22■□□□□ 0.19
HIPK4Q8NE63 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.22■□□□□ 0.19
HIPK4Q8NE63 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.22■□□□□ 0.19
HIPK4Q8NE63 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HIPK4Q8NE63 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.22■□□□□ 0.19
HIPK4Q8NE63 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
HIPK4Q8NE63 AC083849.1-201ENST00000615227 514 ntBASIC16.22■□□□□ 0.19
HIPK4Q8NE63 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.22■□□□□ 0.19
HIPK4Q8NE63 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms