Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC25.59■■□□□ 1.69
CFAP43Q8NDM7 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CFAP43Q8NDM7 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CFAP43Q8NDM7 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CFAP43Q8NDM7 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CFAP43Q8NDM7 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC25.59■■□□□ 1.69
CFAP43Q8NDM7 FTH1-202ENST00000526640 786 ntTSL 2 BASIC25.59■■□□□ 1.69
CFAP43Q8NDM7 TPRX2P-201ENST00000535362 881 ntBASIC25.59■■□□□ 1.69
CFAP43Q8NDM7 WNT11-204ENST00000621122 789 ntTSL 5 BASIC25.59■■□□□ 1.69
CFAP43Q8NDM7 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC25.59■■□□□ 1.69
CFAP43Q8NDM7 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC25.59■■□□□ 1.69
CFAP43Q8NDM7 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CFAP43Q8NDM7 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC25.59■■□□□ 1.69
CFAP43Q8NDM7 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CFAP43Q8NDM7 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC25.59■■□□□ 1.69
CFAP43Q8NDM7 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CFAP43Q8NDM7 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
CFAP43Q8NDM7 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CFAP43Q8NDM7 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC25.58■■□□□ 1.69
CFAP43Q8NDM7 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CFAP43Q8NDM7 NEU3-203ENST00000529024 581 ntTSL 3 BASIC25.58■■□□□ 1.69
CFAP43Q8NDM7 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC25.58■■□□□ 1.69
CFAP43Q8NDM7 IGHV3OR16-16-201ENST00000563644 343 ntBASIC25.58■■□□□ 1.69
CFAP43Q8NDM7 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC25.58■■□□□ 1.69
CFAP43Q8NDM7 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC25.58■■□□□ 1.69
CFAP43Q8NDM7 RPSAP52-203ENST00000622976 1023 ntBASIC25.58■■□□□ 1.69
CFAP43Q8NDM7 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC25.58■■□□□ 1.69
CFAP43Q8NDM7 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
CFAP43Q8NDM7 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC25.58■■□□□ 1.69
CFAP43Q8NDM7 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CFAP43Q8NDM7 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
CFAP43Q8NDM7 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC25.58■■□□□ 1.69
CFAP43Q8NDM7 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.69
CFAP43Q8NDM7 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
CFAP43Q8NDM7 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
CFAP43Q8NDM7 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC25.58■■□□□ 1.69
CFAP43Q8NDM7 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CFAP43Q8NDM7 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC25.58■■□□□ 1.69
CFAP43Q8NDM7 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC25.58■■□□□ 1.69
CFAP43Q8NDM7 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC25.58■■□□□ 1.69
CFAP43Q8NDM7 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.69
CFAP43Q8NDM7 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.69
CFAP43Q8NDM7 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC25.58■■□□□ 1.69
CFAP43Q8NDM7 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC25.58■■□□□ 1.68
CFAP43Q8NDM7 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC25.58■■□□□ 1.68
CFAP43Q8NDM7 AL355994.2-201ENST00000447882 704 ntBASIC25.58■■□□□ 1.68
CFAP43Q8NDM7 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC25.58■■□□□ 1.68
CFAP43Q8NDM7 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC25.58■■□□□ 1.68
CFAP43Q8NDM7 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
CFAP43Q8NDM7 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC25.58■■□□□ 1.68
CFAP43Q8NDM7 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC25.58■■□□□ 1.68
CFAP43Q8NDM7 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC25.58■■□□□ 1.68
CFAP43Q8NDM7 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC25.57■■□□□ 1.68
CFAP43Q8NDM7 AC006538.1-201ENST00000567905 1585 ntBASIC25.57■■□□□ 1.68
CFAP43Q8NDM7 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
CFAP43Q8NDM7 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
CFAP43Q8NDM7 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CFAP43Q8NDM7 PCGF3-213ENST00000620529 1899 ntBASIC25.57■■□□□ 1.68
CFAP43Q8NDM7 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC25.57■■□□□ 1.68
CFAP43Q8NDM7 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CFAP43Q8NDM7 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
CFAP43Q8NDM7 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC25.57■■□□□ 1.68
CFAP43Q8NDM7 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC25.57■■□□□ 1.68
CFAP43Q8NDM7 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
CFAP43Q8NDM7 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC25.57■■□□□ 1.68
CFAP43Q8NDM7 AC104989.1-201ENST00000519711 778 ntBASIC25.57■■□□□ 1.68
CFAP43Q8NDM7 AC123567.1-201ENST00000548294 1261 ntBASIC25.57■■□□□ 1.68
CFAP43Q8NDM7 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC25.57■■□□□ 1.68
CFAP43Q8NDM7 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
CFAP43Q8NDM7 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CFAP43Q8NDM7 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CFAP43Q8NDM7 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CFAP43Q8NDM7 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC25.56■■□□□ 1.68
CFAP43Q8NDM7 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CFAP43Q8NDM7 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC25.56■■□□□ 1.68
CFAP43Q8NDM7 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
CFAP43Q8NDM7 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
CFAP43Q8NDM7 AC015936.2-201ENST00000593177 259 ntBASIC25.56■■□□□ 1.68
CFAP43Q8NDM7 WFDC1-204ENST00000613603 549 ntBASIC25.56■■□□□ 1.68
CFAP43Q8NDM7 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
CFAP43Q8NDM7 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
CFAP43Q8NDM7 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
CFAP43Q8NDM7 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
CFAP43Q8NDM7 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CFAP43Q8NDM7 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
CFAP43Q8NDM7 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC25.55■■□□□ 1.68
CFAP43Q8NDM7 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC25.55■■□□□ 1.68
CFAP43Q8NDM7 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC25.55■■□□□ 1.68
CFAP43Q8NDM7 BOLA2P3-201ENST00000404566 256 ntBASIC25.55■■□□□ 1.68
CFAP43Q8NDM7 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
CFAP43Q8NDM7 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
CFAP43Q8NDM7 AC099548.2-209ENST00000480264 625 ntBASIC25.55■■□□□ 1.68
CFAP43Q8NDM7 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
CFAP43Q8NDM7 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC25.55■■□□□ 1.68
CFAP43Q8NDM7 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC25.55■■□□□ 1.68
CFAP43Q8NDM7 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
CFAP43Q8NDM7 TECR-220ENST00000600083 1204 ntTSL 2 BASIC25.55■■□□□ 1.68
CFAP43Q8NDM7 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC25.55■■□□□ 1.68
CFAP43Q8NDM7 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
CFAP43Q8NDM7 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms