Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 SNX12-206ENST00000622259 661 ntTSL 5 BASIC13.01□□□□□ -0.33
C3orf56Q8N813 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC13.01□□□□□ -0.33
C3orf56Q8N813 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
C3orf56Q8N813 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
C3orf56Q8N813 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
C3orf56Q8N813 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
C3orf56Q8N813 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
C3orf56Q8N813 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
C3orf56Q8N813 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC13.01□□□□□ -0.33
C3orf56Q8N813 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
C3orf56Q8N813 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
C3orf56Q8N813 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
C3orf56Q8N813 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
C3orf56Q8N813 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
C3orf56Q8N813 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
C3orf56Q8N813 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
C3orf56Q8N813 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC13□□□□□ -0.33
C3orf56Q8N813 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC13□□□□□ -0.33
C3orf56Q8N813 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
C3orf56Q8N813 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
C3orf56Q8N813 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
C3orf56Q8N813 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
C3orf56Q8N813 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC13□□□□□ -0.33
C3orf56Q8N813 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
C3orf56Q8N813 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC13□□□□□ -0.33
C3orf56Q8N813 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
C3orf56Q8N813 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC13□□□□□ -0.33
C3orf56Q8N813 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC13□□□□□ -0.33
C3orf56Q8N813 BTBD7P1-201ENST00000447253 1453 ntBASIC13□□□□□ -0.33
C3orf56Q8N813 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13□□□□□ -0.33
C3orf56Q8N813 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC13□□□□□ -0.33
C3orf56Q8N813 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
C3orf56Q8N813 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
C3orf56Q8N813 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC13□□□□□ -0.33
C3orf56Q8N813 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
C3orf56Q8N813 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
C3orf56Q8N813 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC13□□□□□ -0.33
C3orf56Q8N813 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
C3orf56Q8N813 AC142381.1-201ENST00000426099 345 ntBASIC13□□□□□ -0.33
C3orf56Q8N813 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
C3orf56Q8N813 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC13□□□□□ -0.33
C3orf56Q8N813 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC13□□□□□ -0.33
C3orf56Q8N813 DOC2GP-202ENST00000514950 1163 ntBASIC13□□□□□ -0.33
C3orf56Q8N813 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC13□□□□□ -0.33
C3orf56Q8N813 AC092552.1-201ENST00000547243 906 ntBASIC13□□□□□ -0.33
C3orf56Q8N813 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC13□□□□□ -0.33
C3orf56Q8N813 AP005482.1-201ENST00000563722 1273 ntBASIC13□□□□□ -0.33
C3orf56Q8N813 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC13□□□□□ -0.33
C3orf56Q8N813 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13□□□□□ -0.33
C3orf56Q8N813 AC091167.2-201ENST00000579581 588 ntBASIC13□□□□□ -0.33
C3orf56Q8N813 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13□□□□□ -0.33
C3orf56Q8N813 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
C3orf56Q8N813 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
C3orf56Q8N813 AC099568.2-201ENST00000609194 695 ntBASIC13□□□□□ -0.33
C3orf56Q8N813 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC13□□□□□ -0.33
C3orf56Q8N813 AC007431.3-201ENST00000623221 587 ntBASIC13□□□□□ -0.33
C3orf56Q8N813 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC13□□□□□ -0.33
C3orf56Q8N813 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
C3orf56Q8N813 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
C3orf56Q8N813 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
C3orf56Q8N813 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
C3orf56Q8N813 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
C3orf56Q8N813 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
C3orf56Q8N813 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
C3orf56Q8N813 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC13□□□□□ -0.33
C3orf56Q8N813 REXO1L9P-201ENST00000604264 2108 ntBASIC13□□□□□ -0.33
C3orf56Q8N813 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
C3orf56Q8N813 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
C3orf56Q8N813 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
C3orf56Q8N813 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC12.99□□□□□ -0.33
C3orf56Q8N813 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC12.99□□□□□ -0.33
C3orf56Q8N813 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
C3orf56Q8N813 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
C3orf56Q8N813 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
C3orf56Q8N813 STX3-203ENST00000529177 1571 ntTSL 2 BASIC12.99□□□□□ -0.33
C3orf56Q8N813 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
C3orf56Q8N813 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
C3orf56Q8N813 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC12.99□□□□□ -0.33
C3orf56Q8N813 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC12.99□□□□□ -0.33
C3orf56Q8N813 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC12.99□□□□□ -0.33
C3orf56Q8N813 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
C3orf56Q8N813 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
C3orf56Q8N813 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
C3orf56Q8N813 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
C3orf56Q8N813 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC12.99□□□□□ -0.33
C3orf56Q8N813 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
C3orf56Q8N813 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
C3orf56Q8N813 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC12.99□□□□□ -0.33
C3orf56Q8N813 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC12.99□□□□□ -0.33
C3orf56Q8N813 CDK2AP2P3-201ENST00000422476 372 ntBASIC12.99□□□□□ -0.33
C3orf56Q8N813 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
C3orf56Q8N813 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
C3orf56Q8N813 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
C3orf56Q8N813 LITAF-210ENST00000571976 548 ntTSL 2 BASIC12.99□□□□□ -0.33
C3orf56Q8N813 LITAF-214ENST00000574703 486 ntTSL 2 BASIC12.99□□□□□ -0.33
C3orf56Q8N813 AC021097.1-201ENST00000607902 574 ntBASIC12.99□□□□□ -0.33
C3orf56Q8N813 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
C3orf56Q8N813 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
C3orf56Q8N813 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
C3orf56Q8N813 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms