Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC25.71■■□□□ 1.71
VPS8Q8N3P4 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC25.71■■□□□ 1.71
VPS8Q8N3P4 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
VPS8Q8N3P4 MIR943-201ENST00000401286 94 ntBASIC25.71■■□□□ 1.71
VPS8Q8N3P4 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
VPS8Q8N3P4 TSSK5P-201ENST00000423978 907 ntBASIC25.71■■□□□ 1.71
VPS8Q8N3P4 BCRP1-201ENST00000444246 691 ntBASIC25.71■■□□□ 1.71
VPS8Q8N3P4 AQP6-203ENST00000551733 849 ntTSL 3 BASIC25.71■■□□□ 1.71
VPS8Q8N3P4 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
VPS8Q8N3P4 AC073592.8-201ENST00000624126 511 ntBASIC25.71■■□□□ 1.71
VPS8Q8N3P4 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
VPS8Q8N3P4 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC25.7■■□□□ 1.71
VPS8Q8N3P4 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC25.7■■□□□ 1.7
VPS8Q8N3P4 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
VPS8Q8N3P4 REXO1L8P-201ENST00000604378 1897 ntBASIC25.7■■□□□ 1.7
VPS8Q8N3P4 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
VPS8Q8N3P4 VMA21-202ENST00000370361 693 ntTSL 5 BASIC25.7■■□□□ 1.7
VPS8Q8N3P4 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC25.7■■□□□ 1.7
VPS8Q8N3P4 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
VPS8Q8N3P4 CENPM-205ENST00000404067 905 ntTSL 3 BASIC25.7■■□□□ 1.7
VPS8Q8N3P4 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC25.7■■□□□ 1.7
VPS8Q8N3P4 AC055876.3-201ENST00000431496 288 ntBASIC25.7■■□□□ 1.7
VPS8Q8N3P4 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC25.7■■□□□ 1.7
VPS8Q8N3P4 AL365330.1-201ENST00000607459 531 ntBASIC25.7■■□□□ 1.7
VPS8Q8N3P4 AC138649.4-201ENST00000612222 287 ntBASIC25.7■■□□□ 1.7
VPS8Q8N3P4 AC003101.2-201ENST00000612557 442 ntBASIC25.7■■□□□ 1.7
VPS8Q8N3P4 AL138828.2-201ENST00000615812 383 ntBASIC25.7■■□□□ 1.7
VPS8Q8N3P4 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC25.7■■□□□ 1.7
VPS8Q8N3P4 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
VPS8Q8N3P4 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.7
VPS8Q8N3P4 AL035456.1-201ENST00000456064 1369 ntBASIC25.69■■□□□ 1.7
VPS8Q8N3P4 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
VPS8Q8N3P4 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
VPS8Q8N3P4 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
VPS8Q8N3P4 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
VPS8Q8N3P4 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
VPS8Q8N3P4 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC25.69■■□□□ 1.7
VPS8Q8N3P4 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC25.69■■□□□ 1.7
VPS8Q8N3P4 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
VPS8Q8N3P4 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC25.69■■□□□ 1.7
VPS8Q8N3P4 HLA-V-204ENST00000476601 1289 ntBASIC25.69■■□□□ 1.7
VPS8Q8N3P4 MAX-210ENST00000555419 765 ntTSL 5 BASIC25.69■■□□□ 1.7
VPS8Q8N3P4 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
VPS8Q8N3P4 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
VPS8Q8N3P4 GPER1-207ENST00000619052 571 ntTSL 2 BASIC25.69■■□□□ 1.7
VPS8Q8N3P4 AL390754.1-201ENST00000619088 582 ntBASIC25.69■■□□□ 1.7
VPS8Q8N3P4 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
VPS8Q8N3P4 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
VPS8Q8N3P4 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC25.68■■□□□ 1.7
VPS8Q8N3P4 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
VPS8Q8N3P4 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
VPS8Q8N3P4 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC25.68■■□□□ 1.7
VPS8Q8N3P4 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC25.68■■□□□ 1.7
VPS8Q8N3P4 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
VPS8Q8N3P4 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
VPS8Q8N3P4 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
VPS8Q8N3P4 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
VPS8Q8N3P4 RBM39-205ENST00000397370 612 ntTSL 2 BASIC25.68■■□□□ 1.7
VPS8Q8N3P4 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC25.68■■□□□ 1.7
VPS8Q8N3P4 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC25.68■■□□□ 1.7
VPS8Q8N3P4 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC25.68■■□□□ 1.7
VPS8Q8N3P4 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC25.68■■□□□ 1.7
VPS8Q8N3P4 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC25.68■■□□□ 1.7
VPS8Q8N3P4 COQ9-214ENST00000567933 882 ntTSL 3 BASIC25.68■■□□□ 1.7
VPS8Q8N3P4 NAA38-207ENST00000576861 556 ntTSL 3 BASIC25.68■■□□□ 1.7
VPS8Q8N3P4 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC25.68■■□□□ 1.7
VPS8Q8N3P4 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
VPS8Q8N3P4 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC25.68■■□□□ 1.7
VPS8Q8N3P4 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
VPS8Q8N3P4 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC25.68■■□□□ 1.7
VPS8Q8N3P4 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
VPS8Q8N3P4 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC25.68■■□□□ 1.7
VPS8Q8N3P4 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
VPS8Q8N3P4 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC25.68■■□□□ 1.7
VPS8Q8N3P4 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
VPS8Q8N3P4 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
VPS8Q8N3P4 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
VPS8Q8N3P4 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
VPS8Q8N3P4 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC25.67■■□□□ 1.7
VPS8Q8N3P4 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
VPS8Q8N3P4 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC25.67■■□□□ 1.7
VPS8Q8N3P4 AC097493.3-201ENST00000509725 367 ntBASIC25.67■■□□□ 1.7
VPS8Q8N3P4 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC25.67■■□□□ 1.7
VPS8Q8N3P4 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC25.67■■□□□ 1.7
VPS8Q8N3P4 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC25.67■■□□□ 1.7
VPS8Q8N3P4 TEX28P1-201ENST00000613479 1221 ntBASIC25.67■■□□□ 1.7
VPS8Q8N3P4 TEX28P2-201ENST00000617764 1221 ntBASIC25.67■■□□□ 1.7
VPS8Q8N3P4 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
VPS8Q8N3P4 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
VPS8Q8N3P4 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
VPS8Q8N3P4 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
VPS8Q8N3P4 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC25.67■■□□□ 1.7
VPS8Q8N3P4 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC25.67■■□□□ 1.7
VPS8Q8N3P4 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
VPS8Q8N3P4 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
VPS8Q8N3P4 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
VPS8Q8N3P4 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
VPS8Q8N3P4 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
VPS8Q8N3P4 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC25.66■■□□□ 1.7
VPS8Q8N3P4 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms