Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.46■□□□□ 0.22
TMEFF1Q8IYR6 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
TMEFF1Q8IYR6 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TMEFF1Q8IYR6 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEFF1Q8IYR6 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEFF1Q8IYR6 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEFF1Q8IYR6 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TMEFF1Q8IYR6 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEFF1Q8IYR6 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEFF1Q8IYR6 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TMEFF1Q8IYR6 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TMEFF1Q8IYR6 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC16.45■□□□□ 0.22
TMEFF1Q8IYR6 GNAQP1-201ENST00000444815 1067 ntBASIC16.45■□□□□ 0.22
TMEFF1Q8IYR6 RNA5SP410-201ENST00000516285 106 ntBASIC16.45■□□□□ 0.22
TMEFF1Q8IYR6 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.45■□□□□ 0.22
TMEFF1Q8IYR6 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.45■□□□□ 0.22
TMEFF1Q8IYR6 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.45■□□□□ 0.22
TMEFF1Q8IYR6 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEFF1Q8IYR6 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.45■□□□□ 0.22
TMEFF1Q8IYR6 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.45■□□□□ 0.22
TMEFF1Q8IYR6 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.45■□□□□ 0.22
TMEFF1Q8IYR6 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEFF1Q8IYR6 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TMEFF1Q8IYR6 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEFF1Q8IYR6 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TMEFF1Q8IYR6 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEFF1Q8IYR6 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEFF1Q8IYR6 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.45■□□□□ 0.22
TMEFF1Q8IYR6 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEFF1Q8IYR6 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TMEFF1Q8IYR6 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.45■□□□□ 0.22
TMEFF1Q8IYR6 AC012313.1-201ENST00000593393 3059 ntBASIC16.44■□□□□ 0.22
TMEFF1Q8IYR6 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.44■□□□□ 0.22
TMEFF1Q8IYR6 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.44■□□□□ 0.22
TMEFF1Q8IYR6 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMEFF1Q8IYR6 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TMEFF1Q8IYR6 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMEFF1Q8IYR6 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TMEFF1Q8IYR6 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMEFF1Q8IYR6 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.44■□□□□ 0.22
TMEFF1Q8IYR6 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TMEFF1Q8IYR6 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMEFF1Q8IYR6 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.44■□□□□ 0.22
TMEFF1Q8IYR6 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.44■□□□□ 0.22
TMEFF1Q8IYR6 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMEFF1Q8IYR6 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TMEFF1Q8IYR6 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TMEFF1Q8IYR6 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TMEFF1Q8IYR6 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TMEFF1Q8IYR6 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TMEFF1Q8IYR6 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TMEFF1Q8IYR6 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMEFF1Q8IYR6 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.44■□□□□ 0.22
TMEFF1Q8IYR6 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.44■□□□□ 0.22
TMEFF1Q8IYR6 FAM220BP-201ENST00000377689 816 ntBASIC16.44■□□□□ 0.22
TMEFF1Q8IYR6 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMEFF1Q8IYR6 GPR53P-205ENST00000457298 1084 ntBASIC16.44■□□□□ 0.22
TMEFF1Q8IYR6 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC16.44■□□□□ 0.22
TMEFF1Q8IYR6 IGHV3-71-201ENST00000523324 359 ntBASIC16.44■□□□□ 0.22
TMEFF1Q8IYR6 AC135586.1-201ENST00000539323 574 ntBASIC16.44■□□□□ 0.22
TMEFF1Q8IYR6 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.44■□□□□ 0.22
TMEFF1Q8IYR6 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.44■□□□□ 0.22
TMEFF1Q8IYR6 AC105021.1-202ENST00000570572 669 ntBASIC16.44■□□□□ 0.22
TMEFF1Q8IYR6 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.44■□□□□ 0.22
TMEFF1Q8IYR6 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.44■□□□□ 0.22
TMEFF1Q8IYR6 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.44■□□□□ 0.22
TMEFF1Q8IYR6 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMEFF1Q8IYR6 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
TMEFF1Q8IYR6 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMEFF1Q8IYR6 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMEFF1Q8IYR6 AC108860.2-201ENST00000562760 2183 ntBASIC16.44■□□□□ 0.22
TMEFF1Q8IYR6 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMEFF1Q8IYR6 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.44■□□□□ 0.22
TMEFF1Q8IYR6 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.44■□□□□ 0.22
TMEFF1Q8IYR6 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMEFF1Q8IYR6 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMEFF1Q8IYR6 AC116353.5-201ENST00000638148 1699 ntBASIC16.43■□□□□ 0.22
TMEFF1Q8IYR6 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.43■□□□□ 0.22
TMEFF1Q8IYR6 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMEFF1Q8IYR6 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.43■□□□□ 0.22
TMEFF1Q8IYR6 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TMEFF1Q8IYR6 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TMEFF1Q8IYR6 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
TMEFF1Q8IYR6 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
TMEFF1Q8IYR6 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.43■□□□□ 0.22
TMEFF1Q8IYR6 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMEFF1Q8IYR6 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TMEFF1Q8IYR6 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMEFF1Q8IYR6 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TMEFF1Q8IYR6 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.43■□□□□ 0.22
TMEFF1Q8IYR6 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.43■□□□□ 0.22
TMEFF1Q8IYR6 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.43■□□□□ 0.22
TMEFF1Q8IYR6 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.43■□□□□ 0.22
TMEFF1Q8IYR6 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TMEFF1Q8IYR6 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
TMEFF1Q8IYR6 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.43■□□□□ 0.22
TMEFF1Q8IYR6 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.43■□□□□ 0.22
TMEFF1Q8IYR6 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC16.43■□□□□ 0.22
TMEFF1Q8IYR6 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.43■□□□□ 0.22
TMEFF1Q8IYR6 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms