Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC60Q8IWA6 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC60Q8IWA6 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC60Q8IWA6 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CCDC60Q8IWA6 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.42■□□□□ 0.54
CCDC60Q8IWA6 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC60Q8IWA6 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.42■□□□□ 0.54
CCDC60Q8IWA6 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC60Q8IWA6 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC60Q8IWA6 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC60Q8IWA6 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC60Q8IWA6 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC60Q8IWA6 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC60Q8IWA6 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC60Q8IWA6 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.41■□□□□ 0.54
CCDC60Q8IWA6 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC60Q8IWA6 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC60Q8IWA6 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC60Q8IWA6 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC60Q8IWA6 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC60Q8IWA6 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC60Q8IWA6 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC60Q8IWA6 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC60Q8IWA6 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CCDC60Q8IWA6 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC18.41■□□□□ 0.54
CCDC60Q8IWA6 AC107890.1-201ENST00000422478 521 ntBASIC18.41■□□□□ 0.54
CCDC60Q8IWA6 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC60Q8IWA6 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC18.41■□□□□ 0.54
CCDC60Q8IWA6 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC18.41■□□□□ 0.54
CCDC60Q8IWA6 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC60Q8IWA6 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC18.41■□□□□ 0.54
CCDC60Q8IWA6 MIR4453-201ENST00000584019 89 ntBASIC18.41■□□□□ 0.54
CCDC60Q8IWA6 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC18.41■□□□□ 0.54
CCDC60Q8IWA6 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC60Q8IWA6 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CCDC60Q8IWA6 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC60Q8IWA6 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC60Q8IWA6 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC60Q8IWA6 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC60Q8IWA6 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC60Q8IWA6 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC60Q8IWA6 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC60Q8IWA6 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC60Q8IWA6 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC60Q8IWA6 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC60Q8IWA6 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
CCDC60Q8IWA6 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC60Q8IWA6 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC60Q8IWA6 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC60Q8IWA6 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC60Q8IWA6 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC60Q8IWA6 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC60Q8IWA6 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC60Q8IWA6 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC60Q8IWA6 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC60Q8IWA6 MIR943-201ENST00000401286 94 ntBASIC18.4■□□□□ 0.54
CCDC60Q8IWA6 AC093724.1-201ENST00000448659 1027 ntBASIC18.4■□□□□ 0.54
CCDC60Q8IWA6 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC18.4■□□□□ 0.54
CCDC60Q8IWA6 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC18.4■□□□□ 0.54
CCDC60Q8IWA6 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC60Q8IWA6 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC60Q8IWA6 FHL2-212ENST00000607522 759 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC60Q8IWA6 AC020765.3-201ENST00000613051 740 ntBASIC18.4■□□□□ 0.54
CCDC60Q8IWA6 SPTSSB-204ENST00000617024 1292 ntBASIC18.4■□□□□ 0.54
CCDC60Q8IWA6 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC60Q8IWA6 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC60Q8IWA6 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CCDC60Q8IWA6 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC60Q8IWA6 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC60Q8IWA6 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC60Q8IWA6 AC106886.4-201ENST00000623557 2502 ntBASIC18.4■□□□□ 0.54
CCDC60Q8IWA6 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CCDC60Q8IWA6 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CCDC60Q8IWA6 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.54
CCDC60Q8IWA6 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CCDC60Q8IWA6 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CCDC60Q8IWA6 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC60Q8IWA6 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
CCDC60Q8IWA6 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC60Q8IWA6 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC60Q8IWA6 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC60Q8IWA6 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CCDC60Q8IWA6 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CCDC60Q8IWA6 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CCDC60Q8IWA6 BAD-202ENST00000394531 631 ntTSL 3 BASIC18.39■□□□□ 0.53
CCDC60Q8IWA6 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC18.39■□□□□ 0.53
CCDC60Q8IWA6 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC60Q8IWA6 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
CCDC60Q8IWA6 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC18.39■□□□□ 0.53
CCDC60Q8IWA6 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC60Q8IWA6 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC60Q8IWA6 BAD-207ENST00000544785 525 ntTSL 3 BASIC18.39■□□□□ 0.53
CCDC60Q8IWA6 DUT-210ENST00000559935 569 ntTSL 3 BASIC18.39■□□□□ 0.53
CCDC60Q8IWA6 SPCS2P1-201ENST00000561636 679 ntBASIC18.39■□□□□ 0.53
CCDC60Q8IWA6 AC140878.1-201ENST00000565277 250 ntBASIC18.39■□□□□ 0.53
CCDC60Q8IWA6 AC018529.1-201ENST00000613063 361 ntBASIC18.39■□□□□ 0.53
CCDC60Q8IWA6 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC60Q8IWA6 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC60Q8IWA6 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC18.39■□□□□ 0.53
CCDC60Q8IWA6 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms