Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.77□□□□□ -0.04
LINC00346Q8IVM7 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LINC00346Q8IVM7 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.77□□□□□ -0.04
LINC00346Q8IVM7 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.77□□□□□ -0.04
LINC00346Q8IVM7 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.77□□□□□ -0.04
LINC00346Q8IVM7 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LINC00346Q8IVM7 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
LINC00346Q8IVM7 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
LINC00346Q8IVM7 PCDHA1-201ENST00000378133 2726 ntBASIC14.77□□□□□ -0.04
LINC00346Q8IVM7 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LINC00346Q8IVM7 AC026691.1-201ENST00000602502 2017 ntBASIC14.77□□□□□ -0.04
LINC00346Q8IVM7 ME2P1-201ENST00000426028 1970 ntBASIC14.77□□□□□ -0.04
LINC00346Q8IVM7 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LINC00346Q8IVM7 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
LINC00346Q8IVM7 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC14.77□□□□□ -0.05
LINC00346Q8IVM7 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC14.77□□□□□ -0.05
LINC00346Q8IVM7 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC14.77□□□□□ -0.05
LINC00346Q8IVM7 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC14.77□□□□□ -0.05
LINC00346Q8IVM7 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC14.77□□□□□ -0.05
LINC00346Q8IVM7 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
LINC00346Q8IVM7 HNRNPDP1-201ENST00000439535 754 ntBASIC14.77□□□□□ -0.05
LINC00346Q8IVM7 DUSP5P1-201ENST00000441325 1139 ntBASIC14.77□□□□□ -0.05
LINC00346Q8IVM7 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC14.77□□□□□ -0.05
LINC00346Q8IVM7 AC107918.2-201ENST00000530817 355 ntBASIC14.77□□□□□ -0.05
LINC00346Q8IVM7 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC14.77□□□□□ -0.05
LINC00346Q8IVM7 MIR4492-201ENST00000581627 80 ntBASIC14.77□□□□□ -0.05
LINC00346Q8IVM7 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC14.77□□□□□ -0.05
LINC00346Q8IVM7 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC14.77□□□□□ -0.05
LINC00346Q8IVM7 MIR1199-201ENST00000621445 119 ntBASIC14.77□□□□□ -0.05
LINC00346Q8IVM7 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC14.77□□□□□ -0.05
LINC00346Q8IVM7 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LINC00346Q8IVM7 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LINC00346Q8IVM7 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
LINC00346Q8IVM7 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LINC00346Q8IVM7 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LINC00346Q8IVM7 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LINC00346Q8IVM7 AL512652.2-201ENST00000625156 1716 ntBASIC14.77□□□□□ -0.05
LINC00346Q8IVM7 SLC22A20-204ENST00000530038 1673 ntBASIC14.77□□□□□ -0.05
LINC00346Q8IVM7 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
LINC00346Q8IVM7 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
LINC00346Q8IVM7 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.77□□□□□ -0.05
LINC00346Q8IVM7 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.77□□□□□ -0.05
LINC00346Q8IVM7 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LINC00346Q8IVM7 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LINC00346Q8IVM7 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LINC00346Q8IVM7 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
LINC00346Q8IVM7 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
LINC00346Q8IVM7 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC14.76□□□□□ -0.05
LINC00346Q8IVM7 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.76□□□□□ -0.05
LINC00346Q8IVM7 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00346Q8IVM7 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.76□□□□□ -0.05
LINC00346Q8IVM7 AP002414.3-201ENST00000589352 1468 ntBASIC14.76□□□□□ -0.05
LINC00346Q8IVM7 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
LINC00346Q8IVM7 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.76□□□□□ -0.05
LINC00346Q8IVM7 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
LINC00346Q8IVM7 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
LINC00346Q8IVM7 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00346Q8IVM7 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.76□□□□□ -0.05
LINC00346Q8IVM7 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00346Q8IVM7 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00346Q8IVM7 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00346Q8IVM7 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
LINC00346Q8IVM7 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
LINC00346Q8IVM7 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC14.76□□□□□ -0.05
LINC00346Q8IVM7 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
LINC00346Q8IVM7 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC14.76□□□□□ -0.05
LINC00346Q8IVM7 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.76□□□□□ -0.05
LINC00346Q8IVM7 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.76□□□□□ -0.05
LINC00346Q8IVM7 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC14.76□□□□□ -0.05
LINC00346Q8IVM7 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC14.76□□□□□ -0.05
LINC00346Q8IVM7 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.76□□□□□ -0.05
LINC00346Q8IVM7 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00346Q8IVM7 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC14.76□□□□□ -0.05
LINC00346Q8IVM7 AC091167.2-201ENST00000579581 588 ntBASIC14.76□□□□□ -0.05
LINC00346Q8IVM7 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.76□□□□□ -0.05
LINC00346Q8IVM7 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00346Q8IVM7 AL121912.1-201ENST00000603683 238 ntBASIC14.76□□□□□ -0.05
LINC00346Q8IVM7 AC008735.5-201ENST00000623544 497 ntBASIC14.76□□□□□ -0.05
LINC00346Q8IVM7 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00346Q8IVM7 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
LINC00346Q8IVM7 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.76□□□□□ -0.05
LINC00346Q8IVM7 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00346Q8IVM7 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
LINC00346Q8IVM7 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00346Q8IVM7 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00346Q8IVM7 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.76□□□□□ -0.05
LINC00346Q8IVM7 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00346Q8IVM7 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00346Q8IVM7 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
LINC00346Q8IVM7 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.76□□□□□ -0.05
LINC00346Q8IVM7 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
LINC00346Q8IVM7 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00346Q8IVM7 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00346Q8IVM7 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.76□□□□□ -0.05
LINC00346Q8IVM7 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00346Q8IVM7 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
LINC00346Q8IVM7 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.76□□□□□ -0.05
LINC00346Q8IVM7 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00346Q8IVM7 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
LINC00346Q8IVM7 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms