Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC71Q8IV32 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC71Q8IV32 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC71Q8IV32 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CCDC71Q8IV32 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC71Q8IV32 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.64■□□□□ 0.1
CCDC71Q8IV32 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.64■□□□□ 0.1
CCDC71Q8IV32 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC71Q8IV32 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC71Q8IV32 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.64■□□□□ 0.09
CCDC71Q8IV32 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC15.64■□□□□ 0.09
CCDC71Q8IV32 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.64■□□□□ 0.09
CCDC71Q8IV32 PKD1P5-201ENST00000532415 10291 ntBASIC15.64■□□□□ 0.09
CCDC71Q8IV32 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC71Q8IV32 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC71Q8IV32 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC71Q8IV32 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC71Q8IV32 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CCDC71Q8IV32 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC71Q8IV32 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC71Q8IV32 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC71Q8IV32 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.64■□□□□ 0.09
CCDC71Q8IV32 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC71Q8IV32 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CCDC71Q8IV32 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.64■□□□□ 0.09
CCDC71Q8IV32 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.64■□□□□ 0.09
CCDC71Q8IV32 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC71Q8IV32 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.64■□□□□ 0.09
CCDC71Q8IV32 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.64■□□□□ 0.09
CCDC71Q8IV32 AC006557.2-201ENST00000592985 1240 ntBASIC15.64■□□□□ 0.09
CCDC71Q8IV32 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC71Q8IV32 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.64■□□□□ 0.09
CCDC71Q8IV32 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CCDC71Q8IV32 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC71Q8IV32 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC71Q8IV32 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC71Q8IV32 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.64■□□□□ 0.09
CCDC71Q8IV32 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.64■□□□□ 0.09
CCDC71Q8IV32 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC71Q8IV32 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.64■□□□□ 0.09
CCDC71Q8IV32 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC71Q8IV32 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.64■□□□□ 0.09
CCDC71Q8IV32 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC71Q8IV32 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
CCDC71Q8IV32 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.64■□□□□ 0.09
CCDC71Q8IV32 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.64■□□□□ 0.09
CCDC71Q8IV32 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC71Q8IV32 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC71Q8IV32 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC71Q8IV32 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.64■□□□□ 0.09
CCDC71Q8IV32 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC71Q8IV32 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.64■□□□□ 0.09
CCDC71Q8IV32 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC71Q8IV32 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC71Q8IV32 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.63■□□□□ 0.09
CCDC71Q8IV32 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.63■□□□□ 0.09
CCDC71Q8IV32 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.63■□□□□ 0.09
CCDC71Q8IV32 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC71Q8IV32 AC092850.2-201ENST00000623821 2697 ntBASIC15.63■□□□□ 0.09
CCDC71Q8IV32 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.63■□□□□ 0.09
CCDC71Q8IV32 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC71Q8IV32 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.63■□□□□ 0.09
CCDC71Q8IV32 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC71Q8IV32 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CCDC71Q8IV32 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.63■□□□□ 0.09
CCDC71Q8IV32 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC71Q8IV32 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.63■□□□□ 0.09
CCDC71Q8IV32 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.63■□□□□ 0.09
CCDC71Q8IV32 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC71Q8IV32 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC71Q8IV32 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC71Q8IV32 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.63■□□□□ 0.09
CCDC71Q8IV32 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC71Q8IV32 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.63■□□□□ 0.09
CCDC71Q8IV32 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CCDC71Q8IV32 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CCDC71Q8IV32 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC71Q8IV32 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC71Q8IV32 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC71Q8IV32 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CCDC71Q8IV32 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
CCDC71Q8IV32 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC71Q8IV32 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.63■□□□□ 0.09
CCDC71Q8IV32 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.63■□□□□ 0.09
CCDC71Q8IV32 SPDYE21P-201ENST00000413323 827 ntBASIC15.63■□□□□ 0.09
CCDC71Q8IV32 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC71Q8IV32 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.63■□□□□ 0.09
CCDC71Q8IV32 DNAJB3-201ENST00000446806 729 ntBASIC15.63■□□□□ 0.09
CCDC71Q8IV32 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.63■□□□□ 0.09
CCDC71Q8IV32 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.63■□□□□ 0.09
CCDC71Q8IV32 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.63■□□□□ 0.09
CCDC71Q8IV32 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CCDC71Q8IV32 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC71Q8IV32 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.63■□□□□ 0.09
CCDC71Q8IV32 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.63■□□□□ 0.09
CCDC71Q8IV32 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.63■□□□□ 0.09
CCDC71Q8IV32 AC073592.4-201ENST00000623827 446 ntBASIC15.63■□□□□ 0.09
CCDC71Q8IV32 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC71Q8IV32 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
CCDC71Q8IV32 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms