Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC19.88■□□□□ 0.77
RNF20Q5VTR2 AL031432.2-201ENST00000566714 459 ntBASIC19.88■□□□□ 0.77
RNF20Q5VTR2 AL928711.1-201ENST00000570165 459 ntBASIC19.88■□□□□ 0.77
RNF20Q5VTR2 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC19.88■□□□□ 0.77
RNF20Q5VTR2 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC19.88■□□□□ 0.77
RNF20Q5VTR2 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF20Q5VTR2 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF20Q5VTR2 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
RNF20Q5VTR2 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC19.88■□□□□ 0.77
RNF20Q5VTR2 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF20Q5VTR2 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
RNF20Q5VTR2 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC19.87■□□□□ 0.77
RNF20Q5VTR2 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RNF20Q5VTR2 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RNF20Q5VTR2 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
RNF20Q5VTR2 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF20Q5VTR2 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF20Q5VTR2 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC19.87■□□□□ 0.77
RNF20Q5VTR2 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RNF20Q5VTR2 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF20Q5VTR2 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF20Q5VTR2 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
RNF20Q5VTR2 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF20Q5VTR2 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RNF20Q5VTR2 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC19.87■□□□□ 0.77
RNF20Q5VTR2 AC046158.3-201ENST00000624947 2558 ntBASIC19.87■□□□□ 0.77
RNF20Q5VTR2 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC19.87■□□□□ 0.77
RNF20Q5VTR2 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.87■□□□□ 0.77
RNF20Q5VTR2 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF20Q5VTR2 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
RNF20Q5VTR2 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF20Q5VTR2 HCG4B-203ENST00000450128 991 ntBASIC19.87■□□□□ 0.77
RNF20Q5VTR2 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF20Q5VTR2 RPS15-207ENST00000591032 550 ntTSL 3 BASIC19.87■□□□□ 0.77
RNF20Q5VTR2 RPS15-212ENST00000593052 629 ntTSL 2 BASIC19.87■□□□□ 0.77
RNF20Q5VTR2 AC020765.3-201ENST00000613051 740 ntBASIC19.87■□□□□ 0.77
RNF20Q5VTR2 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC19.87■□□□□ 0.77
RNF20Q5VTR2 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RNF20Q5VTR2 HARS-203ENST00000431330 1774 ntTSL 2 BASIC19.87■□□□□ 0.77
RNF20Q5VTR2 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RNF20Q5VTR2 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC19.87■□□□□ 0.77
RNF20Q5VTR2 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF20Q5VTR2 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
RNF20Q5VTR2 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RNF20Q5VTR2 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF20Q5VTR2 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF20Q5VTR2 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF20Q5VTR2 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC19.86■□□□□ 0.77
RNF20Q5VTR2 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC19.86■□□□□ 0.77
RNF20Q5VTR2 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC19.86■□□□□ 0.77
RNF20Q5VTR2 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
RNF20Q5VTR2 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RNF20Q5VTR2 PCGF3-213ENST00000620529 1899 ntBASIC19.86■□□□□ 0.77
RNF20Q5VTR2 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC19.86■□□□□ 0.77
RNF20Q5VTR2 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF20Q5VTR2 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
RNF20Q5VTR2 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF20Q5VTR2 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC19.86■□□□□ 0.77
RNF20Q5VTR2 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC19.86■□□□□ 0.77
RNF20Q5VTR2 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF20Q5VTR2 LINC01144-201ENST00000626198 1710 ntBASIC19.86■□□□□ 0.77
RNF20Q5VTR2 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RNF20Q5VTR2 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF20Q5VTR2 IGLL3P-201ENST00000412472 434 ntBASIC19.86■□□□□ 0.77
RNF20Q5VTR2 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC19.86■□□□□ 0.77
RNF20Q5VTR2 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
RNF20Q5VTR2 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC19.86■□□□□ 0.77
RNF20Q5VTR2 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC19.86■□□□□ 0.77
RNF20Q5VTR2 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC19.86■□□□□ 0.77
RNF20Q5VTR2 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF20Q5VTR2 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC19.86■□□□□ 0.77
RNF20Q5VTR2 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF20Q5VTR2 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF20Q5VTR2 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RNF20Q5VTR2 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RNF20Q5VTR2 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
RNF20Q5VTR2 GCK-209ENST00000616242 2260 ntTSL 5 BASIC19.86■□□□□ 0.77
RNF20Q5VTR2 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RNF20Q5VTR2 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RNF20Q5VTR2 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC19.86■□□□□ 0.77
RNF20Q5VTR2 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF20Q5VTR2 DOC2GP-204ENST00000639052 2548 ntBASIC19.85■□□□□ 0.77
RNF20Q5VTR2 AC005052.1-201ENST00000625181 2492 ntBASIC19.85■□□□□ 0.77
RNF20Q5VTR2 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF20Q5VTR2 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC19.85■□□□□ 0.77
RNF20Q5VTR2 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF20Q5VTR2 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC19.85■□□□□ 0.77
RNF20Q5VTR2 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC19.85■□□□□ 0.77
RNF20Q5VTR2 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
RNF20Q5VTR2 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC19.85■□□□□ 0.77
RNF20Q5VTR2 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
RNF20Q5VTR2 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC19.85■□□□□ 0.77
RNF20Q5VTR2 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF20Q5VTR2 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
RNF20Q5VTR2 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF20Q5VTR2 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC19.85■□□□□ 0.77
RNF20Q5VTR2 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RNF20Q5VTR2 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF20Q5VTR2 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF20Q5VTR2 HMGA1P7-201ENST00000406908 502 ntBASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms