Protein–RNA interactions for Protein: Q53S08

RAB6C, Rab6C, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6CQ53S08 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.35
RAB6CQ53S08 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.27■□□□□ 0.35
RAB6CQ53S08 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.27■□□□□ 0.35
RAB6CQ53S08 AC008741.2-201ENST00000612792 3115 ntBASIC17.27■□□□□ 0.35
RAB6CQ53S08 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
RAB6CQ53S08 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RAB6CQ53S08 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB6CQ53S08 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB6CQ53S08 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB6CQ53S08 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB6CQ53S08 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RAB6CQ53S08 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
RAB6CQ53S08 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RAB6CQ53S08 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB6CQ53S08 PMS2P7-201ENST00000506558 1336 ntBASIC17.26■□□□□ 0.35
RAB6CQ53S08 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB6CQ53S08 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
RAB6CQ53S08 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RAB6CQ53S08 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB6CQ53S08 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB6CQ53S08 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB6CQ53S08 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.26■□□□□ 0.35
RAB6CQ53S08 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.26■□□□□ 0.35
RAB6CQ53S08 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.26■□□□□ 0.35
RAB6CQ53S08 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.26■□□□□ 0.35
RAB6CQ53S08 AL078644.1-201ENST00000609881 752 ntBASIC17.26■□□□□ 0.35
RAB6CQ53S08 AC091812.2-201ENST00000619081 385 ntBASIC17.26■□□□□ 0.35
RAB6CQ53S08 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.26■□□□□ 0.35
RAB6CQ53S08 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB6CQ53S08 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.26■□□□□ 0.35
RAB6CQ53S08 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.26■□□□□ 0.35
RAB6CQ53S08 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB6CQ53S08 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB6CQ53S08 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.26■□□□□ 0.35
RAB6CQ53S08 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB6CQ53S08 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.26■□□□□ 0.35
RAB6CQ53S08 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB6CQ53S08 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB6CQ53S08 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RAB6CQ53S08 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB6CQ53S08 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
RAB6CQ53S08 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB6CQ53S08 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.25■□□□□ 0.35
RAB6CQ53S08 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB6CQ53S08 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RAB6CQ53S08 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB6CQ53S08 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB6CQ53S08 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB6CQ53S08 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB6CQ53S08 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB6CQ53S08 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.25■□□□□ 0.35
RAB6CQ53S08 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB6CQ53S08 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.25■□□□□ 0.35
RAB6CQ53S08 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
RAB6CQ53S08 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.25■□□□□ 0.35
RAB6CQ53S08 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.25■□□□□ 0.35
RAB6CQ53S08 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.25■□□□□ 0.35
RAB6CQ53S08 AC109635.5-201ENST00000533593 962 ntBASIC17.25■□□□□ 0.35
RAB6CQ53S08 AC040169.1-201ENST00000565382 521 ntBASIC17.25■□□□□ 0.35
RAB6CQ53S08 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.25■□□□□ 0.35
RAB6CQ53S08 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
RAB6CQ53S08 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.25■□□□□ 0.35
RAB6CQ53S08 AC092902.6-201ENST00000641783 218 ntBASIC17.25■□□□□ 0.35
RAB6CQ53S08 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB6CQ53S08 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.25■□□□□ 0.35
RAB6CQ53S08 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.25■□□□□ 0.35
RAB6CQ53S08 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB6CQ53S08 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.25■□□□□ 0.35
RAB6CQ53S08 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.25■□□□□ 0.35
RAB6CQ53S08 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.25■□□□□ 0.35
RAB6CQ53S08 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.25■□□□□ 0.35
RAB6CQ53S08 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB6CQ53S08 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB6CQ53S08 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RAB6CQ53S08 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.25■□□□□ 0.35
RAB6CQ53S08 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
RAB6CQ53S08 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB6CQ53S08 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB6CQ53S08 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RAB6CQ53S08 REXO1L8P-201ENST00000604378 1897 ntBASIC17.24■□□□□ 0.35
RAB6CQ53S08 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB6CQ53S08 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB6CQ53S08 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB6CQ53S08 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.24■□□□□ 0.35
RAB6CQ53S08 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.24■□□□□ 0.35
RAB6CQ53S08 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RAB6CQ53S08 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.24■□□□□ 0.35
RAB6CQ53S08 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
RAB6CQ53S08 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB6CQ53S08 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RAB6CQ53S08 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RAB6CQ53S08 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB6CQ53S08 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.24■□□□□ 0.35
RAB6CQ53S08 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
RAB6CQ53S08 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RAB6CQ53S08 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB6CQ53S08 PMS2P4-201ENST00000412466 1052 ntBASIC17.24■□□□□ 0.35
RAB6CQ53S08 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.24■□□□□ 0.35
RAB6CQ53S08 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.24■□□□□ 0.35
RAB6CQ53S08 MIR3909-201ENST00000579518 119 ntBASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms