Protein–RNA interactions for Protein: Q2M329

CCDC96, Coiled-coil domain-containing protein 96, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC96Q2M329 PNMT-202ENST00000394246 821 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC96Q2M329 KRT18P34-201ENST00000488218 1270 ntBASIC19.36■□□□□ 0.69
CCDC96Q2M329 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC96Q2M329 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC96Q2M329 AC027307.2-201ENST00000591252 911 ntBASIC19.36■□□□□ 0.69
CCDC96Q2M329 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC19.36■□□□□ 0.69
CCDC96Q2M329 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC19.36■□□□□ 0.69
CCDC96Q2M329 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC96Q2M329 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC96Q2M329 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC96Q2M329 SNX33P1-201ENST00000592116 1762 ntBASIC19.36■□□□□ 0.69
CCDC96Q2M329 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
CCDC96Q2M329 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC96Q2M329 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC96Q2M329 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC96Q2M329 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC96Q2M329 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC96Q2M329 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
CCDC96Q2M329 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC96Q2M329 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC96Q2M329 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC96Q2M329 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC96Q2M329 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC96Q2M329 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CCDC96Q2M329 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC96Q2M329 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC96Q2M329 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CCDC96Q2M329 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
CCDC96Q2M329 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC96Q2M329 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC96Q2M329 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC96Q2M329 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
CCDC96Q2M329 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC96Q2M329 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
CCDC96Q2M329 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC96Q2M329 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC96Q2M329 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC96Q2M329 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CCDC96Q2M329 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC19.35■□□□□ 0.69
CCDC96Q2M329 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CCDC96Q2M329 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC96Q2M329 HNRNPFP1-201ENST00000391730 1133 ntBASIC19.35■□□□□ 0.69
CCDC96Q2M329 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CCDC96Q2M329 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC96Q2M329 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC96Q2M329 HLA-J-203ENST00000494367 1087 ntBASIC19.35■□□□□ 0.69
CCDC96Q2M329 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
CCDC96Q2M329 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
CCDC96Q2M329 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC19.35■□□□□ 0.69
CCDC96Q2M329 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC19.35■□□□□ 0.69
CCDC96Q2M329 LSM12-202ENST00000585388 942 ntTSL 3 BASIC19.35■□□□□ 0.69
CCDC96Q2M329 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC19.35■□□□□ 0.69
CCDC96Q2M329 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CCDC96Q2M329 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC19.35■□□□□ 0.69
CCDC96Q2M329 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC19.35■□□□□ 0.69
CCDC96Q2M329 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CCDC96Q2M329 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC96Q2M329 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
CCDC96Q2M329 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC96Q2M329 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC96Q2M329 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC96Q2M329 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC96Q2M329 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC96Q2M329 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC96Q2M329 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC19.35■□□□□ 0.69
CCDC96Q2M329 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC96Q2M329 F11R-206ENST00000621309 4770 ntTSL 5 BASIC19.35■□□□□ 0.69
CCDC96Q2M329 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
CCDC96Q2M329 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CCDC96Q2M329 KRT8P39-201ENST00000396270 1433 ntBASIC19.34■□□□□ 0.69
CCDC96Q2M329 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC96Q2M329 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC19.34■□□□□ 0.69
CCDC96Q2M329 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC96Q2M329 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC96Q2M329 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC96Q2M329 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC19.34■□□□□ 0.69
CCDC96Q2M329 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC19.34■□□□□ 0.69
CCDC96Q2M329 RBPMS2P1-201ENST00000437762 623 ntBASIC19.34■□□□□ 0.69
CCDC96Q2M329 CYMP-203ENST00000474680 1263 ntBASIC19.34■□□□□ 0.69
CCDC96Q2M329 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC19.34■□□□□ 0.69
CCDC96Q2M329 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC19.34■□□□□ 0.69
CCDC96Q2M329 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC19.34■□□□□ 0.69
CCDC96Q2M329 KRT8P23-201ENST00000560090 1207 ntBASIC19.34■□□□□ 0.69
CCDC96Q2M329 AC025678.2-201ENST00000562061 970 ntBASIC19.34■□□□□ 0.69
CCDC96Q2M329 LINC01225-203ENST00000563550 1244 ntBASIC19.34■□□□□ 0.69
CCDC96Q2M329 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC96Q2M329 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC96Q2M329 AC008267.7-201ENST00000624570 1194 ntBASIC19.34■□□□□ 0.69
CCDC96Q2M329 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
CCDC96Q2M329 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC96Q2M329 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CCDC96Q2M329 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC96Q2M329 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC96Q2M329 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC96Q2M329 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC96Q2M329 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC96Q2M329 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC96Q2M329 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC19.34■□□□□ 0.69
CCDC96Q2M329 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
CCDC96Q2M329 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms