Protein–RNA interactions for Protein: Q12772

SREBF2, Sterol regulatory element-binding protein 2, humanhuman

Predictions only

Length 1,141 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2Q12772 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SREBF2Q12772 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SREBF2Q12772 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SREBF2Q12772 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.82■□□□□ 0.6
SREBF2Q12772 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC18.82■□□□□ 0.6
SREBF2Q12772 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SREBF2Q12772 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.81■□□□□ 0.6
SREBF2Q12772 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SREBF2Q12772 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SREBF2Q12772 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SREBF2Q12772 AC093503.3-201ENST00000624917 2352 ntBASIC18.81■□□□□ 0.6
SREBF2Q12772 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.81■□□□□ 0.6
SREBF2Q12772 FO393414.2-201ENST00000405153 598 ntBASIC18.81■□□□□ 0.6
SREBF2Q12772 GPAA1P2-201ENST00000417923 928 ntBASIC18.81■□□□□ 0.6
SREBF2Q12772 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC18.81■□□□□ 0.6
SREBF2Q12772 PTK7-212ENST00000476760 902 ntTSL 2 BASIC18.81■□□□□ 0.6
SREBF2Q12772 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC18.81■□□□□ 0.6
SREBF2Q12772 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SREBF2Q12772 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
SREBF2Q12772 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SREBF2Q12772 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
SREBF2Q12772 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SREBF2Q12772 LOX-206ENST00000639739 1626 ntTSL 5 BASIC18.81■□□□□ 0.6
SREBF2Q12772 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.81■□□□□ 0.6
SREBF2Q12772 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
SREBF2Q12772 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
SREBF2Q12772 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
SREBF2Q12772 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SREBF2Q12772 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.8■□□□□ 0.6
SREBF2Q12772 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.8■□□□□ 0.6
SREBF2Q12772 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SREBF2Q12772 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.8■□□□□ 0.6
SREBF2Q12772 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SREBF2Q12772 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SREBF2Q12772 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
SREBF2Q12772 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SREBF2Q12772 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SREBF2Q12772 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SREBF2Q12772 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SREBF2Q12772 AC005229.1-201ENST00000392885 409 ntBASIC18.8■□□□□ 0.6
SREBF2Q12772 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SREBF2Q12772 YBX1P6-201ENST00000442962 1002 ntBASIC18.8■□□□□ 0.6
SREBF2Q12772 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SREBF2Q12772 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC18.8■□□□□ 0.6
SREBF2Q12772 RN7SL190P-201ENST00000582519 257 ntBASIC18.8■□□□□ 0.6
SREBF2Q12772 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC18.8■□□□□ 0.6
SREBF2Q12772 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
SREBF2Q12772 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SREBF2Q12772 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.8■□□□□ 0.6
SREBF2Q12772 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.8■□□□□ 0.6
SREBF2Q12772 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SREBF2Q12772 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
SREBF2Q12772 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SREBF2Q12772 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SREBF2Q12772 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
SREBF2Q12772 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SREBF2Q12772 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.79■□□□□ 0.6
SREBF2Q12772 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SREBF2Q12772 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SREBF2Q12772 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC18.79■□□□□ 0.6
SREBF2Q12772 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SREBF2Q12772 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.79■□□□□ 0.6
SREBF2Q12772 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SREBF2Q12772 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC18.79■□□□□ 0.6
SREBF2Q12772 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC18.79■□□□□ 0.6
SREBF2Q12772 BCRP2-202ENST00000447763 634 ntBASIC18.79■□□□□ 0.6
SREBF2Q12772 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC18.79■□□□□ 0.6
SREBF2Q12772 BCRP6-201ENST00000510112 632 ntBASIC18.79■□□□□ 0.6
SREBF2Q12772 HNRNPA1P13-201ENST00000510646 963 ntBASIC18.79■□□□□ 0.6
SREBF2Q12772 BCRP7-201ENST00000511549 544 ntBASIC18.79■□□□□ 0.6
SREBF2Q12772 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC18.79■□□□□ 0.6
SREBF2Q12772 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
SREBF2Q12772 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC18.79■□□□□ 0.6
SREBF2Q12772 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SREBF2Q12772 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC18.79■□□□□ 0.6
SREBF2Q12772 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SREBF2Q12772 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SREBF2Q12772 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SREBF2Q12772 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC18.79■□□□□ 0.6
SREBF2Q12772 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SREBF2Q12772 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SREBF2Q12772 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.79■□□□□ 0.6
SREBF2Q12772 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SREBF2Q12772 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SREBF2Q12772 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SREBF2Q12772 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SREBF2Q12772 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SREBF2Q12772 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC18.78■□□□□ 0.6
SREBF2Q12772 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SREBF2Q12772 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SREBF2Q12772 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SREBF2Q12772 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
SREBF2Q12772 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SREBF2Q12772 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SREBF2Q12772 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SREBF2Q12772 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.78■□□□□ 0.6
SREBF2Q12772 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SREBF2Q12772 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SREBF2Q12772 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
SREBF2Q12772 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms